KEGG   Gallus gallus (chicken): 424180
Entry
424180            CDS       T01006                                 
Symbol
SCN3A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
  KO
K04836  voltage-gated sodium channel type III alpha
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:gga04040]
    424180 (SCN3A)
Ion channels [BR:gga04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   424180 (SCN3A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel GPHH ATP-synt_B IQ
Other DBs
NCBI-GeneID: 424180
NCBI-ProteinID: XP_003641650
CGNC: 52146
Ensembl: ENSGALG00000011040
Position
7:19896906..19969654
AA seq 2011 aa
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQEHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINVISYFNSTM
DENGTFINTTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQATAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKRRRQKEMSEAEDKGDIDKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRFTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRTRDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASMSSRVVPALPANGKMHSAVDCNGVVSL
VGGPSTLTSPTGQLLPEGTTTETEIRKRRLSSYQISMEMLEDSAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLF
MAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YIKKKIQEFIQKAFVRKQKALEEIKALEEINNKKDSCISNHTAVEISKDMNYLKDGNGTT
SGVGTGSSVEKYVVDESDYMSFINNPGLTVTVPIAVGESDFENLNTEEFSSESDMEESKQ
KLNASSSSEGSTVDIAPPGEGEQAEIEPEEALEPEACFTEGCVQKFPCCQVSIEDGKGKI
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDVSDVNNYTQCEELIKNNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVEDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIILFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAE
MIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDP
HKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSALIIQ
RAYRCYLLKQKVKKVSSIYNKNKNNEGDGQVIKETIIDKLNGNSTPEKTDESSSTTSPPS
YDSVTKPDKEKYEKDKAEKNYKGKDVRENKK
NT seq 6036 nt   +upstreamnt  +downstreamnt
atggcacaggcactgctggtaccgccaggacctgaaagcttccgctattttactagagat
tctctcgcagctattgaaaagcgttctgcagaagaaaaagctaaaaagcccaagcaagaa
catactgatgatgatgatgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
acactgccatttatttatggtgacatacctccaggaatggtttctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataagggaaaggcaatt
ttccgattcagtgccacatctgccttgtatattttaactccttttaatcccatcagaaaa
attgctatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
acaaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatttatacctttgaatcactgataaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagacccatggaactggcttgacttcagtgtcattcta
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctaaagactattgtaggagcc
ctaattcagtctgtgaagaagctctcggatgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaataaatgttatttcctactttaatagcacaatg
gatgaaaatggtacatttattaatacaactgtgagcacatttaactggaaggattacatc
gaggatgaaactcatttctacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcagtgtccagagggatatatatgtgtgaaagctggtagaaatccc
aactatggttacacaagttttgacactttcagttgggcttttctgtcactctttcggcta
atgactcaggacttctgggaaaacctgtatcaactgacactacgtgctgctgggaaaaca
tacatgatattttttgttctggtgatttttctgggctcattctatctgatcaacttgatc
ctggctgtggttgccatggcctatgaggagcagaaccaagcaactatggaagaagcagag
cagaaagaggcagaatttcaacagatgttagaacagctaaagaagcagcaagaagaagca
caggcaacggcagcagtggcagcagcatcagttgcatcaagggatttcagtggggtaggg
ggattaggagaactcttggaaagttcttcagaagcatcaaagttgagctcaaagagtgct
aaagaaagaagaaacagaaggaagagaagaagacagaaagaaatgtctgaagcagaagac
aagggagatattgacaagttccccaagtccgagtcagaagatagtatcagaagaaaaagt
ttccgcttctccacagaaggaagtcaactgacatatgaaaaaaggttcacatctccccat
cagtctttgctaagcatccgtggttccctgttctcaccaaggcgcaacagcaaaacaagc
attttcagtttcagaggtcgcacaagggatataggatctgaaaatgactttgctgatgat
gagcacagcactcttgaggacaacgaaagcagaagggattctctctttgttccaaatcga
catggagaaaggcgtaacagcaacatcagtcaggccagtatgtcatccagagtggtgcca
gcccttccggccaatgggaagatgcatagcgctgtagattgcaacggagtagtctcctta
gttggaggaccttcaactctaacttcacctactggacagcttctaccagagggcaccact
actgaaacagaaataagaaaaagaagactgagttcttatcagatttccatggaaatgctg
gaagattctgctgcaagacaaagagcaatgagtatagccagtatacttacaaacacaatg
gaagagcttgaagaatccagacagaaatgtcccccatgctggtacagatttgcaaatact
ttcttgatctgggattgctggagtccatggttaaaagtaaaacatgttgtcaatttagta
gtgatggatccatttgttgatcttgctataactatttgcattgttttgaacaccttgttt
atggccatggaacattacccaatgacagaacaatttagcagtgtcctttctgtgggaaac
ctggtattcaccgggatattcacagcagaaatggtactaaagataattgctatggaccct
tattattatttccaagaaggctggaatatttttgatggtattatcgttagccttagttta
atggagcttggtcttgcaaatgttgaaggattatcagttcttcgctcattcagattgctt
cgagtttttaagctggcaaaatcttggccaactctaaatatgctgattaagattattggc
aactcagtgggggctttgggtaatttgaccctggtgctggccatcattgtgttcattttt
gctgtggttgggatgcagctgtttggaaaaagctacaaggaatgtgtctgcaagatctcc
agtgactgtgtgcttccacgctggcacatgcatgactttttccactctttcttgattgta
ttccgagttctgtgtggagaatggatagaaacaatgtgggactgcatggaggttgcaggc
caaaccatgtgccttattgttttcatgctggtcatggtgattggaaacctagtggttctg
aacctgtttctggccttgctgctgagctcgtttagctcagacaaccttgctgctacagat
gatgataatgaaatgaacaatctccagattgctgtggcaagaattcagaagggaatagat
tatattaaaaaaaagatacaggaattcatacaaaaagccttcgttagaaaacagaaggct
ttagaagaaatcaaagcacttgaagagataaacaacaagaaagacagctgcatttccaat
catactgctgttgaaataagcaaagatatgaattatcttaaagatgggaatggaactacc
agtggtgtaggcacaggcagcagtgtggaaaaatatgttgttgatgaaagtgattacatg
tccttcataaacaacccaggcctcaccgtgacagtgccaattgctgttggagaatctgac
tttgaaaatttaaatacagaagaatttagcagtgaatctgatatggaagaaagcaaacag
aaactaaatgcatccagttcatctgaaggcagcacagttgatattgcccctcctggagag
ggagagcaagcagaaattgaacctgaagaagctcttgaaccagaagcctgttttacagaa
ggttgtgtgcagaaatttccatgttgccaagtaagtatagaggatggcaaaggaaaaatc
tggtggaatcttagaaaaacctgctacagcatagttgaacacaactggtttgagactttc
attgtcttcatgattctcctcagcagtggagcactagcttttgaagatatatatattgaa
cagcgtaaaactataaagaccatgctggaatatgcggacaaagtttttacatacattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatattttactaatgcc
tggtgctggttggactttctgattgttgatgtctcattggttagtttaatagccaatgct
ttgggctattctgaacttggtgccattaaatcgcttcggacgttaagagctttaagacct
ttaagagccttgtcacgatttgaaggaatgagggtggttgtaaatgctcttgtaggagca
attccatctatcatgaatgtattgctggtttgtcttatattctggctcatcttcagcatc
atgggagtaaatctctttgctggaaaattctatcactgtgtcaacaccacaacaggcgag
atgtttgatgtcagcgatgtcaacaattatactcagtgtgaggaactcataaaaaacaat
caaagtgcccgctggaaaaatgtgaaagtaaactttgataatgtaggagctgggtatctt
gctctgcttcaagtagctactttcaagggatggatggatattatgtatgctgcagttgat
tcaagagatgtagaagatcaacctaagtatgaggacaacctgtacatgtatctttatttt
gtcatctttatcatatttggatcattctttacattgaaccttttcattggtgtcattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgacagaagaa
cagaagaaatattacaatgcaatgaaaaaactgggatccaaaaaaccacagaaacctata
ccaaggccagtgaacaaattccaaggcatggtctttgattttgtcaccaaacaagtattt
gacatcagcatcatgatacttatctgccttaatatggtcacaatgatggtagaaacagat
gaccagagtaaggaaatggaaacaattttatcccggattaaccttgtgttcattatcctt
ttcactggagaatttgtcctcaaactgatttctcttcgccattactacttcactataggc
tggaatatttttgatttcgtggttgtgattctctccatagtaggtatgttcttagctgag
atgattgagaaatattttgtgtcccctactttgttccgagtcatccgacttgccagaata
ggccgcattctgcgcctcattaaaggcgcaaagggaatccgcactctgcttttcgctctg
atgatgtctcttcctgctttgttcaacattggcctgctgctcttcttggtcatgtttatc
tatgcgatatttggcatgtccaactttgcctacgttaagagggaagttgggattgatgac
atgttcaactttgaaacatttggcaacagcatgatctgcctatttcaaattaccacatct
gctggctgggatggcttgttagccccaattcttaacagtggggagccggactgtgaccct
cataaagatcatccagggagctctgttaaaggcgactgtggcaacccttcggttgggatt
ttcttctttgtcagctacatcatcatatcctttttggtggtggtgaacatgtacattgct
gtcattctggagaacttcagtgttgcaactgaagaaagtgctgagcccttgagcgaggat
gactttgagatgttctatgaggtctgggagaagtttgatccagatgcaacacaattcata
gaatacagtaaactatcagattttgcagcttcgttagatcctcctcttctcatagcaaaa
ccaaacaaggtccagctgattgcaatggatctgcccatggtaagcggtgacagaattcac
tgccttgacatcttgtttgctttcacaaagcgtgtgttaggggaaagtggggagatggat
gccctcagaatacagatggaagatcgttttatggcagccaatccttccaaagtctcctat
gaaccaatcacaaccacattaaaacggaaacaggaggaggtatctgctctcattattcag
cgtgcttacaggtgttaccttttaaagcaaaaggttaaaaaagtatctagtatatataac
aaaaataaaaacaacgaaggagatggacaagttataaaagagacaattattgataaacta
aatgggaactccactccagagaaaacagatgagagctcctctacaacttccccaccatcc
tatgacagtgtaacaaagccggataaagaaaaatatgagaaagacaaagcagaaaagaac
tacaaaggtaaagatgtcagggaaaataaaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (14)   
   RefSeq(nuc) (10)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (59)   

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