KEGG   Gallus gallus (chicken): 427164
Entry
427164            CDS       T01006                                 
Symbol
TRIM23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X2
  KO
K07963  tripartite motif-containing protein 23 [EC:2.3.2.27]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    427164 (TRIM23)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:gga04031]
    427164 (TRIM23)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     427164 (TRIM23)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    427164 (TRIM23)
GTP-binding proteins [BR:gga04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Others
    427164 (TRIM23)
SSDB
Motif
Pfam: Arf Roc Ras SRPRB G-alpha zf-RING_UBOX zf-B_box zf-RING_5 zf-RING_2 MMR_HSR1 Gtr1_RagA zf-C3HC4
Other DBs
NCBI-GeneID: 427164
NCBI-ProteinID: XP_004937340
CGNC: 10950
Ensembl: ENSGALG00000014765
Position
Z:complement(20585738..20606784)
AA seq 714 aa
MVRPRDLAAATREEVRKHSAGGAGTSEPGNSCSRYAPSDTATARETTAPTGRCACGALRR
RTVASRALLGRRLLGCVVLEGSPRRQSRGARRELQFFAVWSEEACAVLLLPLQRSACAHW
DWRRCFPVDPLCSAPSKMAALVVNKAGAVPDSSRGASNSRGPTGAAVKVLECGVCEDVFS
LQGDKVPRLLLCGHTVCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELL
ERLQNGPPGQCGTAEEAIGLSGESIIRCDEDEAHVASVYCTVCATHLCADCSQLTHSTKT
LAKHKRVPLADKPHEKTMCSQHQVHAIEFVCLEEDCQASPLMCCVCKEYGKHQGHKHSVL
EPEANQIRASILDMAHCIRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGVGMAHTEHVPG
TAENARSCVRAYFSDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTAC
LHCEKTLQQDDCRVVLAKQEITRLLETLQKQQQQFTELADHVQLDASIPVTFTKDNRVHI
GPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKH
KLRPLWKHYYLNTQVVFVVDSSHRDRVSEAHSELAKLLTEKELRDALLLIFANKQDVAGA
LSVEEITELLSLHKLCCGRNWYIQGCDARSGTGLFEGLDWLSRQLVAAGVLDVA
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggtgcggccgcgagacctggccgccgcaaccagggaagaagtgcgtaagcacagcgcg
ggcggagcaggcacctctgaacccggaaacagctgttcgagatacgccccgtccgacacc
gccacggcgcgcgaaactacagcccccacagggcgttgcgcctgcggggccctacgtcgc
aggacggtcgcctcgcgggcgctcctgggacgacgccttctgggatgtgtagtcctcgag
gggtccccgaggcggcagtctcgcggagcacgacgggaactgcagttctttgctgtttgg
tcggaggaagcgtgcgcagtcctgctcctaccgctgcagaggagcgcatgcgcacactgg
gactggaggcgttgttttcctgtggaccctctgtgctccgccccctcaaagatggcggcc
ctggttgtaaacaaggctggggccgtgccggacagcagccgtggagccagtaacagccga
ggcccgaccggtgccgccgtgaaggttcttgagtgtggagtctgtgaagatgtattctct
ttgcaaggcgataaagttcctcggctgcttctgtgtggccataccgtctgccacgactgc
ctgacccggctgccccttcacggcagggctgtccgctgtccttttgatcggcaagttact
gaactgggagattctggtgtctggggattgaaaaagaattttgctttgttggaactcttg
gaacggttgcagaatgggcctcctggacagtgtgggacagcagaagaagccattggtctt
tctggagagagtatcattcgctgcgatgaagatgaagcccatgttgcatctgtttattgc
actgtttgtgccactcacctgtgtgcagactgttctcagcttactcattctacaaagaca
ctagcgaaacacaaacgtgtacctcttgctgataagcctcatgagaagaccatgtgctcc
caacaccaagtgcatgctattgagtttgtttgtttagaagaggattgtcaggccagtcct
ctcatgtgttgtgtctgcaaagagtatgggaaacaccaaggtcataagcattctgtcttg
gaaccagaagcaaaccagattcgtgcatccattttagacatggcccactgtataagaact
ttcacagaagaaatctcagattattccagaaaattagttggaatagttcagcatatagaa
ggaggagaacaaattgttgaagatggagttggaatggcccacacagaacatgtacctggg
actgcagagaatgctcgctcatgtgtccgagcctatttttcggatcttcatgaaaccctc
tgtcgtcaggaggaaatggctcttagtgttgttgatgctcatgtgagagagaaattgatt
tggcttagacaacaacaagaagacatgactatcctgttgtcacaggtttcaacagcttgc
cttcattgtgaaaagactttacaacaggatgactgcagagtagtgttggccaaacaggaa
attacaagactgctagagacgttacagaagcagcagcagcaatttacagaacttgcagat
cacgtacagctggatgctagcatacctgtcacttttacaaaggacaaccgggtacatatt
ggaccaaaaatggaaattcgagtagtcactctaggattagatggagctgggaaaacaact
attttgtttaagttaaagcaagatgagttcatgcagccaattccaacaataggttttaat
gttgaaacagtagaatacaagaatctgaagtttactatttgggacgtaggaggaaaacac
aagttgaggcccttgtggaagcattattatctcaatacccaagtggtgtttgttgttgat
agtagtcacagagacagggtcagcgaagcacacagtgaacttgcaaaattattaacagag
aaggaattgcgggatgccttgctcttgatctttgctaataaacaggatgtagcaggtgcg
ctttcagtggaagaaattacagaactgttgagtctccacaaactctgctgtggccgtaac
tggtatatccagggttgtgatgctcgaagtggtacaggactttttgaaggactggactgg
ctttcaaggcagttagtggctgctggtgtcctggatgtggcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (56)   

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