KEGG   Gallus gallus (chicken): 427231
Entry
427231            CDS       T01006                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    427231 (KDM4C)
Enzymes [BR:gga01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     427231 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     427231 (KDM4C)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    427231 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 SLX1_C LBR_tudor
Other DBs
NCBI-GeneID: 427231
NCBI-ProteinID: XP_003643040
CGNC: 14233
Ensembl: ENSGALG00000020557
Position
Z:28093794..28397665
AA seq 1069 aa
MAAVTSDSPPNPSCKIMTFRPSMEEFREFNKYLAYMESQGAHRAGVAKVIPPKEWKPRKH
YDDIEDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFKQLANSDKYCTPRYIDYEDLE
RKYWKNLTFVAPIYGADINGSIYDKGIEEWNIAHLNTILDVVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSHGCNAFL
RHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWID
YGKAAKLCTCRKDMVTISMDVFVRKFQPDRYQLWKQGKDLYTIDHTKPTPESTPEVRMWL
QRRKKIRKLSESFQHNRSRSKKLKTPGDKRQSAVATGAEIKETEATTDGFKVNEKPEEKV
RPLNTEVPSGEEESSSRMQLDQHLLDNVKVAGSILSDSFSCPVPLRVEPKADEDKEDSSD
SLIIFEDPGSCVPTSRSCKKEESLKTQHKSKSSVPYLKCQQRNSEAESPAKKVNVSTEDD
VSDLESGNRVGHGEVPVVKRNEDDDMETSNSSEAEGKKVSKSWRHPLNKPPARSPMTLVK
QQATSDEELPETAFAEEEVQETETWARPLVHLWQTRTPNFNAEKEYNACCAKKEPHCAIC
TLLMPYYKPDNLDEENSTYKETNLEETLAIENEKSRPLIPEMCFIYSEENTENYPSNALI
DEDGTSLLISCAKCCIRVHASCYGVPSHEIHNEWLCSRCKTEAWTAECCLCNLRGGALKQ
TTDKKWAHVMCAIAVPEVRFGNVTERTPIDTSRIPLQRLKLKCIFCRQRVKKISGACIQC
SYGRCPASFHVTCAHAAGVLMEPDDWPYVVYITCFRHKINQNVRTKTCEKTITVGQTVIA
KHRNTRYYSCRVIGVTSQLFYEVMFDDGSFSRDTFPEDIVSRDCLKLGPPAEGEVVQVKW
PDGKLYGAKYLGTNTAHMYQVEFEDGSQIVMKREEIYTLDEELPKRVKARFSTASDMRFE
DTFYGADIILGEKKRQRVLSSRFKNEYVDDPGYRTFLKSSFQKKCQKGQ
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggcagcggtcacatctgatagtcctccaaacccaagctgcaaaatcatgacttttagg
ccttcaatggaagaattcagggagttcaacaaatacttagcatacatggaatcacaaggt
gctcatagggccggagttgcaaaggtcatcccaccaaaggaatggaagccaagaaaacat
tatgatgatattgaagatttggtgattcctgctccaattcagcagatggtcactggccag
tccgggctcttcacacaatataacattcagaaaaagccaatgacagtgaaagaattcaag
cagctggccaacagtgacaaatactgcaccccaagatacatagattatgaagatctggag
cgtaaatactggaagaacttgacttttgtggcaccaatttatggagcagatatcaatggg
agcatttatgataaaggtattgaggaatggaatattgctcatcttaatacaatattggat
gttgtaggcgaagactgtggaatttctattgagggtgtaaataccccatatctgtatttt
ggcatgtggaaaacaacgtttgcatggcacactgaagatatggatctctacagcattaat
tatctccattttggggagccgaagtcatggtatgcaattcctccagaacatgggaaacgg
cttgaacgactggctcaaggattcttcccaagcagctctcatggatgtaatgcttttctt
cgccacaagatgactctgatttctccctcaatactgaaaaagtacggaattccttttgac
aaggttacacaagaggcaggggaattcatgatcactttcccgtatggatatcatgcaggc
tttaaccatggcttcaactgtgcagagtcaacaaactttgcaaccatcagatggattgat
tatggaaaagcagcaaagttgtgcacctgcaggaaagacatggtgacaatatccatggat
gtttttgtgaggaagtttcagccagacagataccagctgtggaaacaaggcaaagattta
tataccattgatcatacgaagcccacgcctgaatcaacacctgaagtaaggatgtggctg
caaagaagaaagaaaataagaaaactttctgagagcttccagcacaacagatctcgatct
aaaaagcttaaaactccaggggacaagagacaatctgctgtggcaactggtgcagaaatc
aaagagactgaagcaactactgatggcttcaaggtcaatgaaaaaccagaagaaaaagtg
agaccgctaaatacagaagtgccttctggggaagaagaaagcagtagtagaatgcagctg
gatcaacatttgctggataatgtcaaggttgcaggaagcatcctttcagactcgttttcc
tgtcctgttcctttacgagtggaaccaaaagctgatgaggacaaggaagattccagtgac
tctctcattatatttgaagatccaggttcctgtgtgcccacttcaagaagctgtaagaaa
gaagagagtttgaaaactcagcataagtctaaatcatccgtaccatacctgaagtgccag
caacgtaattctgaggcagaaagcccagctaaaaaggtgaatgtctctacagaggatgat
gtcagcgacctggaaagtggaaatagggtgggacatggtgaagtgccagttgtaaaaagg
aatgaagatgatgacatggaaacatccaattcatcagaagctgaaggaaagaaagtatct
aagagctggcgtcatccactaaataaacccccagctagatctccaatgactttggttaaa
cagcaagcaactagtgatgaagaactgcctgaaactgcatttgctgaagaggaagttcaa
gagacagagacatgggccaggcctctggtccacctttggcagacaagaacacctaatttc
aatgcagaaaaagaatacaatgcatgttgtgcaaaaaaggaaccccactgtgctatttgc
actcttcttatgccatactacaagccagacaatcttgatgaagaaaattctacttacaag
gaaacaaacttagaagaaacactggcgattgaaaatgagaagtctagacctcttattcca
gagatgtgttttatttatagtgaagaaaacactgaaaactatccatcaaatgccttaatt
gatgaagatggaacaagtcttcttatttcctgtgcaaagtgttgtatacgagttcatgca
agttgctatggtgttccttctcatgaaatccataatgaatggttgtgttctcgatgcaaa
acagaagcgtggacagctgaatgttgtctctgcaatttgagaggtggtgcattaaagcaa
actactgacaagaagtgggctcatgtaatgtgtgcaattgccgttccagaagttagattt
ggtaatgttacggagcgtacaccgatagacactagcagaatacctttacaaagattaaaa
ttgaaatgtattttctgcagacagagagttaagaaaatctctggtgcctgcattcagtgt
tcctatggacgctgtccagcttccttccatgtgacctgtgctcatgctgcaggagtgctg
atggagcctgatgactggccgtatgttgtctacatcacttgtttcaggcacaagatcaac
caaaatgtgagaactaaaacatgtgagaagaccattacagttgggcagacggtcatcgca
aaacacaggaatacaagatactacagctgcagagtcattggagtgacatcacagcttttc
tatgaagtcatgtttgatgatggctcttttagtcgggatacttttcctgaagacatcgtg
agcagagattgcctaaagctgggcccacctgcagagggggaggttgttcaagtgaagtgg
cctgatggaaagctgtatggtgcaaagtatctgggaacaaacacagctcacatgtatcag
gttgagtttgaggatggctctcaaatagtgatgaagagagaagaaatctatactctagat
gaagagcttcctaaaagagtgaaagcacgtttttctacagcctctgacatgagatttgaa
gacacgttttacggagcagatattatcctgggagaaaagaagagacagagagtactgagt
tcccgttttaagaatgagtatgtagacgatccaggataccgcaccttcttaaaaagctca
tttcagaagaagtgccagaagggacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (24)   
   RefSeq(pep) (24)   
DNA sequence (30)   
   RefSeq(nuc) (24)   
   GenBank (3)   
   EMBL (3)   
Protein domain (10)   
   Pfam (10)   
All databases (93)   

Download RDF
DBGET integrated database retrieval system