KEGG   Gallus gallus (chicken): 428445
Entry
428445            CDS       T01006                                 
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    428445 (TRIM71)
   04121 Ubiquitin system [BR:gga04121]
    428445 (TRIM71)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     428445 (TRIM71)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     428445 (TRIM71)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    428445 (TRIM71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 zf-B_box SGL zf-RING_5 zf-C3HC4 zf-RING_UBOX DUF4094
Other DBs
NCBI-GeneID: 428445
NCBI-ProteinID: NP_001032352
CGNC: 13926
Ensembl: ENSGALG00000019622
UniProt: Q1PRL4
Position
2:complement(40474702..40529607)
AA seq 876 aa
MASFPEADFQVCPLCKEMCGSPAPLSSNSSTSSSSSQTSGSSGGGGSSCGGAARRLHVLP
CLHAFCRQCLEAQRHPAAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVVV
AAAADEQKNGRAAGSGPAAGSGAGGGGANNRHHGRPPPHRAAAAASSPAAGSAAPSASSS
SSSGGGGPAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTK
DHFIERFAAGPAAASAGPAAPLALSPPYPASPYNILSVFPERASYCQHHDDEVLHFYCDT
CSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQ
VEMKAKVVQSEVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLD
NTISAVQQVLEEGRTIDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAI
KSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPD
GNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGLP
GLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQ
FDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEG
KILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLL
VIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFG
AQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggcttcgttcccggaggccgacttccaggtgtgcccgctgtgcaaggagatgtgcggc
tcgcccgccccgctctcctccaactcgtccacctcgtcgtcctcgtcgcagacctcgggc
tcctcggggggcggcggctcgtcgtgcgggggcgcggcgcggcggctgcacgtcctgccc
tgcctgcacgccttctgccgccagtgcctggaggcgcagcggcaccccgccgcgggggac
gcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcgggc
atggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtcgtggtggtg
gcggccgccgccgacgagcagaagaacggccgcgccgccggctccgggcccgccgccggc
tccggcgcggggggcggcggggccaacaaccgccaccacggccgcccgccgccgcaccgc
gccgccgccgccgcctcctcgcccgccgccggctccgccgcgccctccgcctcctcgtcc
tcttcctcgggcggcggcggcccggcggcgctgctgctgcggcggccgcacagccggcag
ggcgagccgcgctgcagctcctgcgacgagggcaacgccgccagctcgcgctgcctggac
tgccaggagcacctgtgcgacaactgcgtgcgggcgcaccagcgcgtccgcctcaccaag
gaccacttcatcgagcgcttcgccgccggccccgccgccgcctccgccggccccgccgcg
ccgctcgccctcagcccgccctaccccgcctcgccctacaacatcctctccgtcttcccc
gagcgggccagctactgccagcaccacgacgacgaggtactgcatttctactgtgatacc
tgctctgtccccatatgtcgtgaatgtaccatggggcgacatgtgggtcacagctttatc
tacctccaagatgccctccaggactccagaactcttaccatccagctcctggcagatgct
cagcaaggacgacaggctattcagttgagtattgaacaggcccaggctgtggcagagcaa
gttgagatgaaagcgaaggtggtacagtctgaagtcaaagcagtgactaccagacataag
aaggccttggaagagcgagagtgcgagctgctctggaaggtggaaaagattcgtcaagtc
aaggctaagtcgctctacttgcaagttgaaaagttacgtcagaacctaaataagctggac
aacactattagtgctgttcagcaggtcctggaggaaggccgtaccatagatattcttctg
gcccgggaccgcatgctggctcaggtgcaggagctcaagaatgtgagaggccttctgcag
ccacaggaggatgacaggatcatgttcacgccgcctgaccaggcgttgtatatggccatt
aaatcaatgggctttgtcagtagtggggcatttgctcctctgaccaaagccactggggaa
ggcctcaagcgtgcgctgcagggcaaagtagcctctttcacagttataggctacgaccac
gatggtgagcctcgcctttcaggaggtgacatgatctctgcagtggtaatgggcccagat
ggaaatctgtttggggcagacgtcagtgatcagcagaacggaacctacctggtcagctac
cgtccgcagctagagggagagcatctggtgtccgtgatgatgtgcaaccaacacattgag
aacagccccttcaaagttgtggtgaaatctgggcgcagctacataggtattgggctaccc
gggctctcgtttggcagcgaaggagacagcgatgggaaactctgccgcccctggggggtt
agcgtagacaaagaaggctacatcatcgtggctgaccgcagcaataaccgtatccaggtg
ttcaaaccatgtgggactttccatcacaagtttggcacgctcggttcccggcctggccag
ttcgatcgtcccgccggtgtggcctgtgacgtctcacgccggatcgtcgtggctgacaag
gacaatcatcgcatccagattttcacgtttgaggggcagttcattctgaagtttggggag
aaaggaacaaagaatgggcaattcaattacccgtgggacgtggccgtcaacgcagagggc
aaaatcctggtctccgacacaaggaaccatcgcgttcagttgttcgggcccgatggtgtg
tttcttaataagtacggctttgaaggggcactctggaagcactttgattcccccagaggt
gtgactttcaatcacgagggccacttggtagtgacagacttcaacaaccatcgccttctg
gtcatccatgcagattgccagtcagcacgcttcctgggctcggaggggagcgggaacggg
cagttcctgcgcccgcagggagtggcggtggatcaagaggggcgcatcatcgtggctgac
tccaggaaccaccgggtgcagatatttgagtccaatggtagctttttatgcaagttcggc
gctcagggaagcggctttggtcagatggaccgtccttcaggtatagctgtcacccctgat
ggcatgattgtggtggtcgactttggaaacaatcgaatcctcgtcttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (13)   
   RefSeq(nuc) (7)   
   GenBank (3)   
   EMBL (3)   
Protein domain (9)   
   Pfam (9)   
All databases (84)   

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