KEGG T01006: 430516

Gallus gallus (chicken): 430516

Entry

430516 CDS T01006

Gene name

LIG1

Definition

ligase I, DNA, ATP-dependent

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

gga Gallus gallus (chicken)

Pathway

gga03030	DNA replication
gga03410	Base excision repair
gga03420	Nucleotide excision repair
gga03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:gga03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:gga03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:gga03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:gga03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

363745059

NCBI-GeneID:

430516

CGNC:

53965

Position

LGE64

AA seq 775 aa
MQRRITSFFAPPRAADGAVPAHVQKLERRPPEETPQERRDPDGSADAASPGSSSAPVPPT
SPRAPCCPPSPQQSGDRDGDSDRDSGSPASKRCRQSPSDQDKGPPPPCKSPAPNSHIPVE
PSQYDPSRSGYHPVQDACWGHGRSVPYLAVARTFERIEEASSRLKIIEILTNLLRSVVAL
SPSELLPCLLLCLNRPGAPSEGLELGIGETLLTRALAQATGRQLAQIRSEAQDKGDLGLV
AESSRCTQRTVVPPAPLSASGVLGKLREMAAMSGNASASKKIDIIKGLFVACRHSEARYL
VRSLSGKLRIGLAEQSVLTALAHAIALTPPGQEWPLAVVDAGQSMAPDARRTWLEEQSRI
LKQTFCELPDYAAIVPVLLEHGLEQLPKHCGITPGVPLKPMLAQPARCVSELLKRFEEAA
FTCEYKYDGERTQIHVLESGAVFIYSRNQENTTSKYPDLVQRIPKMLKPGVRSCILDAEA
VAWDKVTKQLQPFQVLMTRKRKDVDAAAIKVQVCVYAFDLLYLNGEPLVREPLATRRQLL
RQSFEEVEGEFLFATSMDTRSADEVSDFLDKAIKASCEGLMVKTLEVEATYEIAKRSHKW
LKLKKDYLDGLGDTLDLVVIGAYLGKGKRAGIYGGFLLACYDEESEEYQSICKIGTGFTE
ESLEKHYNFLKEHVLTQPRPYYRWDNAVAPDRWLAAVQVWEVKCGDLSISPVYRAAVGLV
DEDKGISLRFPRFLRVRGDKKPEEATSSTQVAELYKKQQQIQNQQQAEKGDEEFY

NT seq 2328 nt +upstreamnt +downstreamnt
atgcagcggcggatcacgtctttcttcgccccccccagggctgcagatggcgccgtccca
gcgcatgtgcagaagctggagcggcgccctcccgaagagaccccccaggaacgtcgggac
cccgatgggagcgcggatgccgcatcccctggcagcagctctgcccctgtaccccccaca
tcccctcgtgccccctgctgtcccccctccccacagcagtcaggggacagggatggagac
agtgatagggacagtggctcccctgcatccaagcgctgccgtcagtcacccagtgaccag
gacaagggacctccccctccctgcaaatctccagcccccaacagccatataccggtggag
ccatctcagtatgaccccagcaggagtgggtaccacccagtgcaggatgcgtgctggggg
catggacgcagtgtcccctacctggcggtggctcgcaccttcgagcgcatcgaggaagcc
tcatcccggctgaagatcattgagatcctcaccaacctcctgcgctccgtggtggccctg
tccccctccgaacttctcccctgccttcttttgtgcctcaaccgtcccggagccccctct
gaggggctggagctgggcatcggcgagaccctgctcacccgtgcccttgcccaggccact
ggccgccagctggctcagatccgcagtgaagcacaggataaaggggatttggggctggtg
gccgaaagcagccgctgcacccaacgcacggtggtgccaccggccccgctgagtgccagt
ggtgtccttggcaagctgcgggagatggctgccatgtcaggcaatgcgtctgctagcaag
aagattgacatcatcaagggactgtttgttgcctgccggcactcagaggcacgatacctc
gtccgatcgctcagtgggaagctacgcattgggctggctgagcagtcggtgctcactgca
ctggcacacgccattgctctcaccccaccagggcaagagtggccgctggctgtggtggat
gctgggcagagcatggcacctgatgcacgtagaacttggttggaggagcagagccgcatc
cttaagcagactttctgcgagctgccagactatgctgccattgtcccggtgctgctggag
catggcctggagcagctccccaagcattgcggcatcactccaggtgttcccttgaagccc
atgctggcccaacctgcccgctgcgtcagtgagctgctgaagcgctttgaggaggctgca
ttcacctgcgagtacaaatatgatggagaacgaacccagatccacgttctggagagcgga
gccgtcttcatctacagccgcaaccaggagaacacaacctccaagtaccctgacctcgtc
cagcgcatccccaagatgctgaagcccggtgtgcgttcgtgcatcctggatgcagaagcg
gtggcttgggacaaggtcaccaagcagctgcagcctttccaggtgctgatgacgaggaag
aggaaggatgtggatgctgctgccattaaggtgcaagtgtgcgtctatgcctttgatctg
ctatacctcaatggggagccactggtgcgggagcccttggccacacgacgtcagttgctg
cgacagtcattcgaggaagtggagggtgaattcctctttgccacctcaatggacactcgc
agtgctgatgaggtctctgatttcctggacaaagccatcaaggcctcctgcgagggtctc
atggtaaagacactggaggtggaagccacctacgagattgcgaagcggtcccataagtgg
ctgaagctgaagaaggactacctggatggccttggggacacgctggacctcgttgtcata
ggtgcctatctgggcaagggcaagcgtgcaggcatctatgggggcttcctgctggcctgc
tatgacgaggagagtgaggagtaccagagcatctgcaagataggcactggtttcactgaa
gagagcttggagaaacactacaacttcctcaaggaacatgtgttaactcaaccgcgtccc
tattaccgctgggacaacgcagtggcccccgaccgttggctggcagctgtgcaggtctgg
gaggtgaaatgtggggacctctccatttcccctgtctacagggcagctgtggggctggtg
gatgaggacaagggcatctcgctgcgcttcccacggttcctgcgtgtgcgcggggacaag
aaacctgaggaggccaccagcagcacgcaggtggccgagctctacaagaagcagcagcag
atccagaaccagcagcaggcagagaagggggatgaggagttctattga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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