KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101149641
Entry
101149641         CDS       T02442                                 
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101149641 (LSM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101149641 (LSM1)
Messenger RNA biogenesis [BR:ggo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101149641 (LSM1)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     101149641 (LSM1)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 101149641
NCBI-ProteinID: XP_004046951
Ensembl: ENSGGOG00000022658
UniProt: G3S9N7
Position
8:74057314..74070712
AA seq 133 aa
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq 402 nt   +upstreamnt  +downstreamnt
atgaactatatgcctggcaccgccagcctcatcgaggacattgacaaaaagcacttggtt
ctgcttcgagatggaaggacacttataggctttttaagaagcattgatcaatttgcaaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggagagtgacacacccctccagcaagtatccattgaagaaattctagaagagcaaagg
gtggaacagcagaccaagctggaagcagagaagttgaaagtgcaggccctgaaggaccga
ggtctttccattcctcgagcagatactcttgatgagtactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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