KEGG   Gorilla gorilla gorilla (western lowland gorilla): 109025566
Entry
109025566         CDS       T02442                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03410  Base excision repair
ggo04140  Autophagy - animal
ggo04217  Necroptosis
ggo04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109025566
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109025566
  09143 Cell growth and death
   04217 Necroptosis
    109025566
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    109025566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ggo03036]
    109025566
   03400 DNA repair and recombination proteins [BR:ggo03400]
    109025566
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ggo04147]
    109025566
Chromosome and associated proteins [BR:ggo03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    109025566
DNA repair and recombination proteins [BR:ggo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     109025566
   MMR (mismatch excision repair)
    Other MMR factors
     109025566
Exosome [BR:ggo04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   109025566
SSDB
Motif
Pfam: HMG_box HMG_box_2 Prothymosin DUF3106 Nucleo_P87 TFB6 Polyoma_lg_T_C PPP4R2 Astro_capsid_p FTCD_C YABBY DNA_pol_phi SLC52_ribofla_tr RNA_pol_3_Rpc31
Other DBs
NCBI-GeneID: 109025566
NCBI-ProteinID: XP_030871764
Position
11:9869014..9901612
AA seq 272 aa
MELKLEAEGGEHYDIFLLIYRFCKKWRMYPEKYEDKSHCSTLSSIETALGKVRVSVNFSE
FSKKFSERWKNMSAKEKGKFGQARGKFEDMAKADKSRYKREMKTYIPPKGETKKKFKDPN
APKRPPSAFFLYFSEYGPKIKGERPGLSIGDVVKKLGEMWNNTAADDKQPYEKRSVKLKE
KYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDED
EEEDGDDERAGSSAVFLLSIKHLIPLYTTHSF
NT seq 819 nt   +upstreamnt  +downstreamnt
atggaactgaaactggaggcagaaggtggagagcattatgacatttttcttttgatttac
cgcttttgtaagaagtggcgcatgtacccagagaagtatgaagataagagccattgcagt
acattgagctccatagagacagcactggggaaagtgagagtttcagtcaacttctcagag
ttttctaagaagttctcagagaggtggaagaacatgtctgctaaagagaaaggaaaattt
ggccaggcacgaggaaaatttgaagatatggcaaaggcggacaagtcccgttataagaga
gaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttcaaggatcccaat
gcgcccaagaggcctccttcagccttcttcctgtacttctctgagtatggcccaaaaatc
aaaggagaacgtcctggcctgtccattggtgatgttgtgaagaagctgggagagatgtgg
aataacactgctgcagacgacaagcaaccttatgaaaagaggtcggtgaagctgaaagaa
aaatacgaaaaggatattgctgcatatcgagctaaaggaaagcatgatgcagcaaacaat
ggagttgtcaaggctgcaaaaagcaagaaaaagaaggaagaggaggaaaatgaggaagat
gaagaggatgaggaggaggagaaagatgaagaagatgaagatgaagaagatgatgaagat
gaagaagaagatggtgatgatgaacgagctggttctagtgcagtttttcttttgtctata
aagcatttaatccccctgtacacaactcactccttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (29)   

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