KEGG   Gossypium hirsutum (upland cotton): 107886807
Entry
107886807         CDS       T04793                                 
Name
(RefSeq) ABC transporter B family member 1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    107886807
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ghi02000]
    107886807
   04147 Exosome [BR:ghi04147]
    107886807
   04090 CD molecules [BR:ghi04090]
    107886807
Enzymes [BR:ghi01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     107886807
Transporters [BR:ghi02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    107886807
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107886807
CD molecules [BR:ghi04090]
 Proteins
  107886807
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N Zeta_toxin ABC_ATPase AAA_16 AAA_29 AAA_22 RsgA_GTPase AAA_15 AAA_5 SbcC_Walker_B nSTAND1 APS_kinase DUF815 AAA_25 DUF87 Rad17 DUF1360
Other DBs
NCBI-GeneID: 107886807
NCBI-ProteinID: XP_016666374
UniProt: A0A1U8HSQ7
Position
A01:117763356..117768858
AA seq 1329 aa
MSKDSEEIKRIEQWKWSEMQGLELVSDPSLNPKIQTEEASSSSSCSKLESDNNGGNEEKL
QKEVPSIGFNELFRFADGLDYVLMGIGSLGALVHGCSLPIFLRFFADLVNSFGSNANNMD
KMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQYFDT
EVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLGVVPL
IAVIGAIHTITLAKLSAKTQEALSQGGNIVEQTIVQIRVVLAFVGESKALQAYSSALKIA
KKIGYKTGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLG
LGQSAPSMSAFAKAKVAAAKIFRIIDHKPGIDRDSESGLELESVTGLVELKNVDFAYPSR
PDVKILNNVSLCVPSGKTIALVGSSGSGKSTVVSLIERFYDPTSGEVMLDGHDIKTLKLR
WLRSQIGLVSQEPALFATTIKENILLGRPDANDIEIEEAARVANAHSFIVKLPDGFDTQV
GERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLV
IAHRLSTIRKADLVAVLQDGSVSEIGTHDELMAKGENGAYAKLIRMQEAAHETALNNARK
SSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLEGYHPNYRMEKLDFKE
QAGSFWRLVKMNSPEWIYALVGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHAYMIREIG
KYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESAR
IAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATV
LQKMFMKGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSENKIVRLFSSNLQTPLKHCFW
KGQIAGSGFGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLT
LAPDFIKGGRAMQSVFELLDRKTEIEPDDPDATQVPDRLRGEVELKHVDFSYPSRPDIPI
FRDLNLRARAGKTLALVGPSGCGKSSVIALIQRFYEPSSGRVMIDGKDIRKYHLKSLRKH
ISIVPQEPCLFATTIYENIAYGHESASEAEIIEAATLANAHKFISSMPDGYKTFVGERGV
QLSGGQKQRIAIARALVRKAELMLLDEATSALDAESERSVQEALHRACSGKTTIVVAHRL
STIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYARMIQLQRFTNSQVFEMTSGSSSSK
QKEVNEREG
NT seq 3990 nt   +upstreamnt  +downstreamnt
atgtcaaaagattcagaagagataaagaggatagaacaatggaaatggtctgaaatgcaa
ggccttgaacttgtttctgatccttctttaaaccccaaaattcaaacagaagaagcttct
tcatcatcatcttgttcaaagcttgaaagtgacaacaatggtggaaatgaagagaagcta
caaaaagaagtgccttcaattgggttcaatgaattatttagatttgcagatgggttagat
tatgtattaatgggaattggttcacttggagctcttgttcatggctgttctttacctatt
ttccttcgtttctttgctgatcttgttaattcctttggttctaatgctaataatatggac
aagatgatgcaagaagttctgaagtatgcattttatttccttgtggtgggtgctgcaatt
tgggcatcttcatgggcagaaatttcatgttggatgtggactggtgaaagacaaacaaca
aagatgaggattaagtatctagaagcagctttgaatcaagacattcaatattttgatact
gaagttagaacatctgatgttgtttttgccattaatactgatgctgtaatggttcaagat
gctattagtgagaagttgggtaatttcattcattacatggcaacatttgtgtctggcttt
gtggtgggtttcacagcagtatggcaattagctttggttacacttggagttgttccatta
attgctgtaattggagcaatacataccataacattagctaagctctctgcaaaaacacaa
gaagctttatcacaaggtgggaacattgtggaacagacaatagttcaaatccgggttgtt
ttggcttttgtcggtgaatcgaaagcattacaagcttactcatcagcattgaaaatagca
aaaaagataggttataaaactggatttgcaaagggaatgggattgggggcaacctacttt
gtcgtgttctgttcttatgctttgcttctttggtatggaggttatctggttagacatcat
tacactaatggaggacttgccattgccaccatgtttgcagttatgattggtggattgggt
ttgggacagtctgcaccaagcatgtctgcatttgcaaaggctaaagtggcagcagcaaaa
attttccgtattatcgatcataaacccggtatcgatagagatagcgagtcgggtttggag
ttggaatcggttactggattagttgagttgaaaaatgtggattttgcatacccttcaaga
cccgatgtaaagattcttaacaatgtttccttatgtgttccttctggaaaaaccatagct
ttggttggaagtagcggttcggggaaaagcaccgtggtgtcacttattgagagattttac
gatcctacttcaggggaagtaatgctagatggacatgacataaagacattaaagctaaga
tggttaaggtcacaaataggacttgtaagccaagagcctgcactttttgctaccaccatt
aaagaaaacatcctcttagggaggcccgatgcgaacgatatcgagattgaagaagctgcg
agggtggctaatgctcattcattcattgtgaagctacctgatggtttcgacactcaggtt
ggggagagaggacttcaactctcaggtggacagaagcaaagaatcgctatagcaagggca
atgttgaagaatccggcaatcttgttattggatgaagctactagtgcactagattctgag
tccgaaaagctggtgcaagaggcccttgatcggtttatgattgggaggactactctcgta
attgctcatcggctttcaaccattcggaaggctgatcttgtagctgtactccaggatgga
agtgtttcggaaatcggtacgcatgatgaacttatggccaaaggagaaaacggtgcctat
gctaaactcattcggatgcaagaggcagcacacgaaaccgcccttaataatgctagaaaa
agtagtgcaaggccatctagtgctcggaactcagtaagctcaccaatcattgcccggaat
tcatcatatggccgctcaccatattcacgcaggctgtctgacttctctacttcggatttt
agcctttcccttgagggataccaccctaattaccgaatggaaaagcttgatttcaaggag
caagcgggttccttctggcgtcttgtgaaaatgaattcacccgaatggatttatgcttta
gttggttctataggatccgttgtttgcggctcccttagcgctttctttgcttatgtgctg
agtgctgttctcagtgtttactacaacccagaccatgcttacatgattcgagaaatcggg
aaatactgctatctgttaattggactttcatcggctgcacttctcttcaacacactacag
cattctttttgggatattgtgggagaaaatctcacgaaacgggtgcgagagaagatgctg
actgcagtgctgaaaaatgaaatggcctggttcgatcaggaggaaaacgagagtgctagg
attgctgcaaggttagctcttgatgcgaacaatgtacgatcagctattggagaccggatt
tcagttatcgtgcagaacacggcactcatgcttgttgcttgcactgctggttttgttttg
cagtggcgccttgcccttgtcctcattgcagtcttccctgtggttgtagcagccacggtt
ttgcagaaaatgtttatgaaaggtttctcaggagatttagaagctgctcatgccaaggcc
actcaactagctggagaggccattgccaatgtaagaactgttgctgcattcaattccgag
aacaaaatcgttcgccttttctcctcaaaccttcaaactccattgaaacactgcttttgg
aaaggacaaattgcaggaagcgggttcggggtagctcagtttgcactatatgcttcttat
gcacttggtctttggtatgcttcatggcttgtgaagcatgggatctctgatttttccaaa
acaatccgagtctttatggttcttatggtctctgccaatggtgcagccgaaacattgacc
ctggctccagacttcatcaaaggaggtcgagccatgcaatcagtctttgaacttcttgac
cgtaaaactgagattgagcctgatgacccggatgccacacaagttccagaccggcttcgt
ggagaagttgaactaaagcatgtagacttctcttacccttcacgtcctgacatcccaatt
ttccgggaccttaatctccgcgcccgagccggaaaaacccttgcccttgttggtccaagt
ggatgtggtaaaagctcggttattgcacttatacaaagattttacgagccctcatccgga
cgtgttatgatagatggaaaagacataaggaaataccacctcaaatcgctgagaaaacac
atttcaatcgttccacaagagccttgcctctttgctaccactatttacgaaaacatcgcc
tacggacatgaatctgcaagcgaggctgagatcattgaggcagctacactagccaacgcc
cacaagttcatatcctcaatgcctgatggttacaaaacgtttgttggggagagaggggtt
caactttccggaggccaaaaacagagaatcgccatcgcaagggctctagtgaggaaagca
gagcttatgctgctcgatgaagcaaccagtgccctcgatgctgaatctgagagatcagtc
caagaggctctacaccgtgcttgctcgggtaaaactacgattgtggtggctcatcggtta
tcaacaatcagaaatgctcatgtcattgcagtaattgatgatgggaaagttgcagagcaa
ggatcccattcacatttactcaaaaactatcctgatggatgttatgcacggatgatacaa
ttacaaaggttcacaaatagccaagtttttgaaatgacctcaggctcaagttcatcaaaa
caaaaggaagtcaatgaaagagaaggttaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (19)   
   Pfam (19)   
All databases (38)   

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