KEGG   Gossypium hirsutum (upland cotton): 107890121
Entry
107890121         CDS       T04793                                 
Name
(RefSeq) uncharacterized protein LOC107890121
  KO
K03505  DNA polymerase delta subunit 4
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03030  DNA replication
ghi03410  Base excision repair
ghi03420  Nucleotide excision repair
ghi03430  Mismatch repair
ghi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107890121
   03410 Base excision repair
    107890121
   03420 Nucleotide excision repair
    107890121
   03430 Mismatch repair
    107890121
   03440 Homologous recombination
    107890121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107890121
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107890121
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    107890121
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      107890121
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     107890121
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 107890121
NCBI-ProteinID: XP_016670122
UniProt: A0A1U8HVS1
Position
A11:84767365..84768246
AA seq 122 aa
MATTSKNMNVFYRQKKNGTTSTGKKSTKSPSPKHAATFGSEITQPPALVSHGGSLDLKDD
FDEQEQVLRQFDMNMAYGPCMGITRLDRWERAQRMGLNPPKEIESLLKGGKVKLESLFDG
RV
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcaacaacatcgaagaacatgaatgttttctacaggcagaagaagaacggcactacc
tctaccggaaaaaaatcaactaaaagcccatctcccaaacacgccgctactttcggttcc
gaaatcacccaaccccctgctcttgtttctcatggcggttcactcgatctcaaagatgat
tttgatgaacaagagcaagtgttaaggcaatttgatatgaacatggcatacgggccgtgt
atggggataacgcggctggatcggtgggaaagagctcaaagaatggggctaaaccctcct
aaagagattgaaagccttttgaaaggtgggaaagtgaagttagaaagtttatttgatggt
cgtgtttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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