KEGG   Gossypium hirsutum (upland cotton): 107902649
Entry
107902649         CDS       T04793                                 
Name
(RefSeq) 5'-3' exoribonuclease 3 isoform X1
Organism
ghi  Gossypium hirsutum (upland cotton)
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 107902649
NCBI-ProteinID: XP_040949980
Position
D05:complement(16817330..16826117)
AA seq 1096 aa
MGVPAFYKWLAEKYPLILVDVIEEVPEMVDGVTIAVDTSKPNPNRIEFDNLYLDMNGIIH
PCFHPEDRSSPRTFDEVFRRIFEYIDRLFIMVRPRKLLFMAIDGVAPRAKMNQQRSRRFR
AAKDAAEAAAEEARLREEFEREGKRLPPKDETQLSDSNVITPGTSFMAVLSIALQYYIHL
RLNYDPGWKNIKVILSDANVPGEGEHKIMSYIRLQKNLPGFDPNTRHCLYGLDADLIMLA
LATHEVHFSILREIIFTPGEDKCFLCGQMGHIAAKCDGTAKRKSGEFDEKGDRKNVARKP
YQFLNIWTLREYLEHEMRISNSPFEIDLERIVDDFIFMCFFVGNDFLPHMPTLEIREGAI
DLLMTIYKKEFRRMGGYLTDGSKPKLSRVEHFIQAVGSYEEQIFRKRALLHQRQAERIKR
GKAQAGGGDDAEPQSQPDSIVPVTRFNGSRLASGSSPAPFQQTMESNGDESSGRPHKVRR
LNSGVTIDAAIVEAEDSIESDMLENKEELEAKLKELIHNKTDVFNSKDSKEDKIKLGEPG
WKERYYQEKFLAETPEEMETTRKDVVLKFTEGLCWVMHYYYEGVCSWRWFYPYHYAPFAS
DLKDLGQLNIQFELGSPFKPFNQLLGVFPAASSHALPEQYRKLMTDPNSPIIDFYPTDFE
VDMDGKRFSWQGIAKLPFIDEERLLTEVAKIEHTLTEEEARRNSTMCDMLFVAASHRLSE
QIFSLDNRCKRLTERQQVEVEEVKPDLSDGMNGYIFPCAGDTHPPIFRSPIKDMEDILAN
EVICCIYRTPKAHKHIPRPPAGVIFPPKMIQLSDLKPKPLLWHEDSGRRPFQNGRFAAAR
HLVEGSMLKSPVERYNPPGSISGRKLGEASHRLIANSLKKLKVDRTGFSNNVQAPPPSIA
TAPHIPPFNSHVNNGSLNQGQAVVAPSEQDYSRAGSQKQPRRAPPEHDSRAGYPLSQNLP
FDFSNAQSYYPYPICVPGSYLHYPPNHQNGGVRLITSPMEQISAVPEPQPDLSGKKRRYN
TRYQANLSGSYPQCGGIMAPQGDLNGSAVIPLLHQPYPQPHPHLLHEQRGTQPHGANQHQ
RGNQQQGGNPFSVLDR
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgggagtgccagcgttttacaaatggttagcggagaagtatccgcttatcttggttgac
gttatcgaggaagtaccggagatggtcgacggcgtcactattgcggtggatacgagtaaa
cctaaccctaatagaatcgagtttgataatctttatctcgacatgaacgggatcattcat
ccttgtttccaccccgaggacagatcttcgccaagaacttttgatgaagtatttcggaga
atttttgagtatattgacaggttgtttattatggtccgtcctcgaaagcttttgtttatg
gctattgatggcgttgcccctcgggctaaaatgaatcaacagcgatctaggcgttttaga
gcagcaaaagatgctgcagaggcggcagctgaagaagcacgacttcgagaggaatttgag
agggagggcaaaaggcttcctcctaaagatgaaacgcagctttctgattcaaatgttatt
acacctggcacttcatttatggctgttctgtcaattgctttgcagtactatatccacctt
agattaaattatgaccctggatggaaaaatataaaggtaattctatctgatgcaaatgtt
cccggtgaaggggaacataaaattatgtcgtatatacggctccaaaagaaccttcctggt
tttgatccaaatacacgccattgcctgtatggtttggatgctgatttaattatgttagcc
ttggccactcatgaagttcacttttcaatcctccgggagattatcttcacccctggagaa
gataaatgtttcctgtgtggtcagatgggccatatagctgcaaaatgtgatggaacggca
aagcggaagtctggagaatttgatgagaaaggtgatcgaaaaaatgttgccagaaagcca
taccagtttctgaacatatggacactcagggaatatctagaacatgagatgagaatcagc
aattctccttttgaaattgatttagaacgtattgtggatgattttatattcatgtgcttc
tttgttggcaatgatttcttacctcatatgcctacactggagattcgtgagggagcgatt
gacttgttaatgaccatatacaagaaggaatttagaagaatgggtggttatttgacagat
ggaagcaagccaaaattgagccgggtagagcattttatacaggctgtgggatcctatgaa
gaacaaatattccggaaaagagcactactgcatcagcgtcaagcagaaagaatcaagcgt
ggaaaagcacaagctggaggaggagatgatgctgagcctcaatctcaacctgattctatt
gttccagttactagatttaatggttcccgtcttgcctctggctcttcacctgcaccattt
cagcaaacaatggagtcaaatggtgatgaatcctccggtcgaccgcacaaagtgcggcgt
ttaaattcaggggtcactatcgatgctgccattgtcgaagcagaggatagtattgaatca
gatatgctcgagaacaaagaagaattggaagcaaaacttaaggagttgatccacaacaaa
actgatgtttttaactccaaagatagcaaggaagacaagattaaactgggagagccaggg
tggaaggaaaggtattatcaagaaaagtttttggctgaaactcctgaagaaatggaaaca
acacgaaaagatgttgttttgaagttcacagaaggtctatgctgggtcatgcattattac
tatgaaggggtttgttcttggagatggttttatccttatcattatgcaccctttgcttct
gatttaaaggaccttggtcagctaaatattcagtttgagctgggttcccctttcaaacca
tttaatcagttattgggggtttttcctgctgcgagttcccatgcacttcccgaacagtat
aggaaattgatgactgatccaaattcacccattattgacttttatccaactgattttgaa
gttgacatggatggaaagcggttttcttggcagggtattgcaaaattgccttttattgat
gaagagcgccttctcacagaggttgcgaaaatagaacacactttgacggaggaagaagct
cgacgaaacagtacaatgtgtgacatgctttttgtggcggcatcacatcgtctctcagaa
caaatcttttctcttgacaatcgttgtaaacgattgacagaaaggcaacaggttgaagtt
gaggaagtcaaaccagatttgagtgatgggatgaatggttacatattcccttgtgctgga
gacactcatcctcctatattcaggtctcccatcaaggacatggaagatatattggccaat
gaagtcatatgttgcatatatagaaccccgaaagctcataaacatatccctcgtcctcca
gctggggttatattccctcctaagatgatccaactcagtgatttaaaacccaaacctctg
ttatggcacgaagattctgggaggagaccttttcagaatggaaggtttgctgcagctcgg
catctggtggaagggtcaatgctcaaaagtccggtggaaaggtataaccctcctggatcc
atttctggccgtaagcttggggaggcatctcacagacttattgctaatagcttgaagaag
ttgaaagtggatcgcactgggtttagtaataatgtgcaggctccaccaccatcaattgcc
actgctccccatattcctccattcaattcccatgtaaataatgggtctctgaaccaggga
caggctgtggtggctccttctgaacaagattattctcgtgcaggatctcagaaacagcct
agaagggctcctccagaacatgattctcgtgcaggttaccctttatctcagaatcttcca
ttcgatttttccaatgcccagagttactatccctatcctatatgtgttcctggaagttat
ttgcattaccctccaaatcatcagaatggtggagtgaggctcataaccagtcctatggaa
caaatttcagccgtgcctgaacctcaacctgatctaagtggtaaaaagcggaggtataat
acaaggtaccaggcaaatttaagtggcagttatccgcagtgtggtggcataatggctcca
caaggcgacctaaatggttccgcagttatccctcttcttcatcagccttatcctcaacct
catcctcatcttcttcatgagcaaagagggacgcagccacacggggctaaccaacatcaa
aggggtaatcaacaacagggagggaacccgttttctgtattagatagatag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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