KEGG   Gossypium hirsutum (upland cotton): 107909299
Entry
107909299         CDS       T04793                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107909299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107909299
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107909299
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107909299
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-rbx1 Sina_RING
Other DBs
NCBI-GeneID: 107909299
NCBI-ProteinID: XP_016692266
UniProt: A0A1U8JPQ5
Position
D02:65514350..65516802
AA seq 261 aa
MDVEQYFEDNEAYDPPSTEGKRSLDKWENSPGPFTGSDDDPSAGFDCNICLDSVQDPVVT
LCGHLYCWPCIYKWLHCPTISTDNLDQKQQQCPVCKAELSNTTLIPLYGRGQTTKASTDN
TPEFGIVIPQRPLAPTYGVGSIRSPNSSDNLRFQQPVQHHGYSYQPQIYYAQQGSYPDSS
MLSPGGTMINVLDPVTRMFSEMVYTRVFGNSITDLHTYPNSYNLGGTTSRRIRRQLMQAD
KSLSRISFFLCCCIFFCLLLF
NT seq 786 nt   +upstreamnt  +downstreamnt
atggacgttgaacagtactttgaagataatgaagcttatgaccctccaagtacagaaggg
aaaagatccttggacaagtgggagaattcaccaggtccgttcacaggttccgatgatgat
ccctctgctggttttgactgcaacatctgcctagactcggtgcaggatccggtggttact
ctatgcggtcacctctattgttggccctgcatttacaaatggcttcattgtccgaccatc
tccactgataacctagaccagaaacagcagcaatgccctgtgtgcaaagctgaactttca
aataccacactgattcctctttatggcaggggccaaacaactaaggcatcaacagacaac
actcccgaattcggtatagtcataccacagagacctcttgctcctacttacggtgttggc
tcaataaggtcgcctaatagttctgataatctacggtttcagcagccggtacagcaccat
ggttattcatatcaaccacaaatctactatgctcaacagggcagttatcctgattcatcg
atgcttagtccaggtggcacgatgataaatgtactagatccggtgacccgaatgttcagt
gagatggtatacacaagggtatttgggaactcgataacagatttacatacatatccgaat
tcatacaatctcggggggactactagtcgtaggatcagaaggcaattaatgcaagccgat
aagtcactaagcagaataagttttttcctctgctgctgcattttcttctgtcttcttttg
ttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system