KEGG   Gossypium hirsutum (upland cotton): 107912482
Entry
107912482         CDS       T04793                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107912482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107912482
   03032 DNA replication proteins [BR:ghi03032]
    107912482
Spliceosome [BR:ghi03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107912482
  U2 snRNP components
    107912482
 Complex B
  U1 snRNP components
    107912482
  U4/U6.U5 tri-snRNP components
    107912482
 Complex C
  U2 snRNP components
    107912482
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107912482
SSDB
Motif
Pfam: LSM SM-ATX Gemin7
Other DBs
NCBI-GeneID: 107912482
NCBI-ProteinID: XP_016696168
UniProt: A0A1U8K5C6
Position
D11:15534105..15536197
AA seq 114 aa
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKMVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPAAGRPLGCGRGRGRGRGRGRGR
NT seq 345 nt   +upstreamnt  +downstreamnt
atgaagctcgtgaggtttttaatgaagttaaataacgagactgtctccatcgagctcaag
aacggaactgtcgtccatggcaccatcacaggggttgatgttagcatgaatacacatttg
aagatggtgaaactaacgctcaagggaaaaaaccccgttactcttgaccatctgagtgtc
cggggtaacaacattcgttattatattctccctgacagcttgaatctggaaactttgctt
gtggaggagacaccaagagttaaacctaagaagccagctgcaggacggcctttgggatgt
ggtcggggtagggggcgtggacgtggtcgtggcagaggtcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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