KEGG   Gossypium hirsutum (upland cotton): 107916345
Entry
107916345         CDS       T04793                                 
Name
(RefSeq) ESCRT-related protein CHMP1B
  KO
K12197  charged multivesicular body protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107916345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107916345
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107916345
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    107916345
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107916345
  Exosomal proteins of other body fluids (saliva and urine)
   107916345
  Exosomal proteins of colorectal cancer cells
   107916345
SSDB
Motif
Pfam: Snf7 Ist1
Other DBs
NCBI-GeneID: 107916345
NCBI-ProteinID: XP_016701089
UniProt: A0A1U8IQY9
Position
D10:6546503..6547707
AA seq 203 aa
MGNTEKLLNQIMDLKFTSKSLQRQAKKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIR
KRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMGNIVKSLESSLATGNLQKMSETMDK
FEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP
TKTQEKVDEDDLSRRLAELKARG
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggcaatacggagaagctgttgaaccagatcatggacctcaaattcacctccaaatcg
ctgcaacgccaggccaagaagtgcgagaaggaggagaaatctgagaaattgaaggtgaaa
aaggcgatcgagaaaggtaacatggacggtgctcggatctacgccgagaacgccatccgt
aagcgcactgagcagatgaactacctgcgtctcgcttcccgactcgatgctgtagttgcc
aggctcgatacccaggctaagatgaccaccatcaacaagtccatgggaaatatcgtcaag
tctctcgaatcttccttggccaccggcaatttgcagaaaatgtcagagacaatggataaa
ttcgagaagcagtttgtgaatatggaggtccaggcagagtttatggagagtgctatggct
ggctctacttcattgtccacaccagaaggtgaggtcaacagcttgatgcagcaagtggct
gatgattatgggttggaggtctctgttgggttgccacagcccgccgctcatgctgtgcca
accaagacacaggagaaggttgatgaggacgatttgtcaaggcgcctcgccgagcttaag
gctagaggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system