KEGG   Gossypium hirsutum (upland cotton): 107922749
Entry
107922749         CDS       T04793                                 
Name
(RefSeq) general transcription factor IIE subunit 2
  KO
K03137  transcription initiation factor TFIIE subunit beta
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107922749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107922749
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     107922749
SSDB
Motif
Pfam: TFA2_Winged_2 TFIIE_beta Hydrolase
Other DBs
NCBI-GeneID: 107922749
NCBI-ProteinID: XP_016708393
UniProt: A0A1U8L4U1
Position
A11:1943532..1946511
AA seq 283 aa
MALQEKLDRFNKQQEKCQSMLSNIAGKSLSSRAAAAPKPASAPPFSGARPSAPVKFSNDT
ERLQHINSIRKSPVGAQMKRVIDILFQTRQAFTPEQINEACYVDVNGNRDVFEGLRKNPK
VYYDGKRFSYKAKHDVKNKNELLVLIRKFIEGIAVIDLKDAYPNVMEDLQALKAAGQIWL
LSNFDSQEDIAFPNDPRVPIKVDDDLKELFRSIELPRDMLDIEKDLQKNGMKPATNTAKR
RAAAQVQGFSAKPKPKQKNKEFSKKAKLTNAHLPDLFQNLKNS
NT seq 852 nt   +upstreamnt  +downstreamnt
atggcattgcaagagaagttggatagatttaataagcagcaggagaagtgtcagtcgatg
ctctccaacatcgccgggaaatcattatcatctagggcagccgcagctccaaaaccggca
tctgcaccgcctttttctggtgcaaggccttctgctcctgtcaaattctcaaatgatacc
gagaggcttcaacatattaatagcatcaggaaatctcctgttggagctcagatgaaacgt
gttatcgacattctttttcagacaaggcaagctttcacaccggaacagatcaatgaagca
tgttatgtcgatgtgaatggcaatagagatgtttttgagggcctgaggaaaaatccaaaa
gtgtactatgacggaaagcgcttctcttacaaggctaagcatgatgtaaaaaacaagaac
gaacttcttgttttgattcggaaatttatagaaggcattgctgttatcgatctcaaggat
gcatacccaaatgtgatggaagacttgcaggctctgaaagctgcaggtcagatttggctg
ctatcgaattttgattctcaggaagacatagccttccctaatgatcccagggtacctatt
aaggtagatgatgaccttaaagagttatttcgttcaattgaattgccacgagacatgctc
gacattgagaaagatctgcagaagaatggaatgaaacccgccacgaacacggcaaaaaga
agagctgctgcgcaagtgcagggcttttccgccaagccaaagcctaaacagaaaaacaag
gagttctccaagaaggctaaactaacaaatgcacatcttcctgaccttttccagaatctc
aagaattcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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