KEGG   Gossypium hirsutum (upland cotton): 107923388
Entry
107923388         CDS       T04793                                 
Name
(RefSeq) protein mago nashi homolog 2
  KO
K12877  protein mago nashi
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
ghi03015  mRNA surveillance pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107923388
  09122 Translation
   03013 Nucleocytoplasmic transport
    107923388
   03015 mRNA surveillance pathway
    107923388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107923388
   03041 Spliceosome [BR:ghi03041]
    107923388
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107923388
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   EJC/TREX
    107923388
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 107923388
NCBI-ProteinID: XP_016709086
UniProt: A0A1U8L357
Position
D11:complement(6754640..6756540)
AA seq 151 aa
MAAEEDSGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPS
VLKECRRIIADSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 456 nt   +upstreamnt  +downstreamnt
atggcggccgaggaggacagcggagagttttacctccgctactacgtgggccacaaaggg
aaattcgggcacgagtttttggagttcgagttcaggccagatgggaagctccgatacgct
aacaactccaactacaaaaacgacaccatgatccgcaaagaggtcttcctcactccttcc
gttcttaaggaatgccgccgcatcatcgccgacagcgagataatgaaggaagatgataac
aattggccagaaccagaccgtgttgggcggcaagagcttgagatagtgatggggaatgag
cacatctctttcacaacttcaaagattgggtcccttgttgatgttcagagcagtaaggat
cctgaaggtcttcgcatattttattatctggttcaggatttgaagtgctttgtattctct
cttatctcactccacttcaagatcaagcctatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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