KEGG   Gossypium hirsutum (upland cotton): 107931535
Entry
107931535         CDS       T04793                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 16 isoform X1
  KO
K14321  nucleoporin-like protein 2
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107931535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107931535
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107931535
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_4 zf_CCCH_4 Torus zf-CCCH_2
Other DBs
NCBI-GeneID: 107931535
NCBI-ProteinID: XP_016718933
UniProt: A0A1U8LZV7
Position
D04:complement(1381975..1389531)
AA seq 374 aa
MHNKKEACRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQAISHQQKPNPFGFGVQNN
AQSKGANDFGNKQSQFKNTWTRSSASSGAPSLRQPDNQPQATNHRCNDPESCKRIIAEDF
EHERPLWKLTCYSHWKNSPCDIVGDVSYEELRAAAYDDAKRGLSLQSIIERERNLLNSKL
VEFENFLRNPYRGPAGSAAAQQIPFPGATTIVLSPTTQNTVAPQSNVPPSVSSFSQLGAS
LNTGFSPGPSVFSANNVPSANAFSFGNQQPNQSVAASFPTNMANFSNSSAINPAINQFSA
AAVSTQNFSSSSIQSPAFLNVSLSNSEAVGREATNVQLGNNLPTTVASGDSNIWLKEKWT
PGEIPEEAPPDAYV
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgcataataagaaagaagcttgcagaaactttcagcgcggcagctgtcagtatggtgaa
aggtgcaaatttcttcatgtgattcagcaacagccaaagtctaatgcatttggatttggc
acacaagctatctcacaccaacaaaagccaaacccatttggttttggtgtccagaacaat
gctcagtcaaaaggggccaatgattttggaaataaacagagccagttcaagaatacatgg
acccgatcttctgcaagcagtggtgccccttcattgcggcagcctgacaatcagcctcag
gcaacaaaccatagatgcaatgatcctgagtcctgcaaacgtattattgctgaagatttt
gagcacgagagacccttgtggaagcttacatgctacagccattggaaaaattccccttgc
gatattgtcggtgatgtcagctatgaagaattgcgggcagcagcttatgatgatgcaaaa
cgtgggttaagcttgcaatctattattgagcgagagaggaatttactgaattcaaagtta
gttgagtttgaaaactttcttcgtaatccctataggggacctgctggctctgcggcggca
caacaaattccatttccgggagccactacaattgtcctttctcccactactcaaaatact
gtcgctcctcaaagcaatgtccctccgtcagtctccagttttagtcagctgggagcttca
cttaatacaggattctcaccggggccttctgtattttcagcaaacaatgttccatcggcc
aatgccttttcatttggtaaccagcaacctaaccagtcagtagcagcttccttccccaca
aatatggccaacttcagcaacagtagtgccattaatcctgctattaaccaattttctgcc
gcagcagtatcaacgcaaaacttcagctcatccagcatacagtctcctgctttcttgaat
gtctcgctctcaaattctgaagcggttggacgagaagctacaaatgttcagttaggaaat
aacttgccaacgacggttgcttctggggattcaaatatttggttaaaagagaaatggact
cctggagagattcctgaagaagctcctccagatgcttatgtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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