KEGG   Gossypium hirsutum (upland cotton): 107932057
Entry
107932057         CDS       T04793                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107932057
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    107932057
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107932057
   03036 Chromosome and associated proteins [BR:ghi03036]
    107932057
Protein phosphatases and associated proteins [BR:ghi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107932057
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107932057
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107932057
SSDB
Motif
Pfam: B56 Sec7-like_HUS
Other DBs
NCBI-GeneID: 107932057
NCBI-ProteinID: XP_016719482
UniProt: A0A1U8LY47
Position
D13:60852038..60855699
AA seq 506 aa
MIKQILRKLPRKSQKSDSLDSAGNDSDNHASNSDDGVQCTNFGNKISSRLRVVKRVSSAV
FPASIMAGVEAVEPNLSFNNVSNPQKPNLFISKLNLCCEACNSSDPDKGTAEQDLKRRTL
IELVDFVSSGSAKFNEAAIAAMCKMCAINLFRVFPPKYRSNTASGEADDEEPMFDPAWSS
LQLVYDLFLQFISYSSLDAKVAKKYIDQPFILRLLDLFESEDPRERVCLKTILHRIYGKF
TVHRPFVRKAVSNIIYTFVFETERHNGIAELLEIFGSIISGFAVPLKEEHKMFLCRVLIP
LHKPKSVGVYHQQLTYCVVQFIDKDPKLANSVITGLLKYWPVTNSQKELMFISESEEILE
MISMTEFQKIMVPLFRRIACCLNSFHYQVAERAHMLWNNEHVLNLIKHNRQVIFPLIFPA
LERNSRNHWHQTVLNLTKNTRKMLSEIDDELTLACERKLEEENSQSNEASEKRKLTWERL
ELAAGFEPAAANFVPPLKPATCSVAC
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgatcaaacaaattctaagaaaactcccacgcaagtcgcaaaaatctgactcgttagat
tcagctggaaatgattcagacaaccatgcttctaactcggatgatggagttcaatgtaca
aattttgggaataaaatatcaagtcgattacgtgtggttaaacgggtgtcctcagctgtt
tttcctgctagcattatggctggagtggaggcggttgagccaaatctgtctttcaataat
gtttcaaatccacagaaaccgaacctgtttatcagtaaattgaacctctgctgcgaggct
tgtaattctagtgatcctgataaaggtactgccgagcaagatcttaaacggcgaacattg
atagagcttgttgattttgtttcttcggggtctgcaaagttcaatgaagcagcaattgct
gcaatgtgtaaaatgtgtgctattaacctgttccgagtttttccacctaaatatcggtcc
aataccgctagtggtgaagctgacgatgaagaaccaatgtttgatcccgcctggtccagt
ttacaactcgtatatgatctatttcttcagtttatcagttacagttctcttgatgcaaag
gtcgcaaaaaagtacatagatcagccttttattttgagattacttgacctatttgagtcc
gaggatccccgggaaagagtctgtttgaaaacaatcctgcataggatttatgggaaattc
acggtgcacaggccctttgtacgaaaagctgttagcaatatcatctatactttcgttttt
gaaaccgaaaggcataacggtattgctgagctcttggagattttcggaagtattattagc
ggatttgctgtaccattgaaggaggagcacaagatgtttctatgtcgagtccttattcct
ctacacaaaccgaaatcagtaggtgtttatcatcaacaacttacatactgtgttgtgcag
tttatcgataaggacccgaagttagctaatagtgtgattacgggactgttaaagtactgg
ccggttacgaatagccaaaaggagttgatgtttataagcgagtcagaagagattttggag
atgattagcatgactgagttccaaaagatcatggttccactgttccggcgtattgcatgc
tgcttaaacagcttccattaccaggtggctgaacgagcccacatgctatggaacaatgag
catgtccttaatcttatcaagcataaccggcaggtaattttccctctcatctttccagcc
ctcgagcggaattcacggaatcattggcaccaaactgtgcttaatctgacaaaaaacacg
agaaaaatgttgtctgagattgacgatgagctcacacttgcctgtgagcgtaagttggag
gaagaaaattcccagtcaaacgaggcatccgagaagaggaaactaacatgggaacgcctg
gaactagctgctggtttcgaacccgcagctgctaatttcgttcctcctctaaaaccggct
acctgctctgttgcctgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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