KEGG   Gossypium hirsutum (upland cotton): 107933231
Entry
107933231         CDS       T04793                                 
Name
(RefSeq) exopolygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107933231
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107933231
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 MaAIMP_sms
Other DBs
NCBI-GeneID: 107933231
NCBI-ProteinID: XP_016720878
UniProt: A0A1U8M5E5
Position
A02:7541257..7543329
AA seq 422 aa
MAAFAIVMMVCLVLIHGGQCKGLFNAAEALHKAKDAENGDVGPDVKAFNVLDYGAKPDGK
TDSSINFRRTFEAACNFHGDAMMVIPEGEFLMGPVLFSGPCSNPSLLIIQVNGIVKAQSN
MAYYRGGGDDDTDWITFQAIDGLIVSGRGTFHGQGSQVWGFNDCARKSNCVRLPATLKFI
KVTDAMIRGIKSIDPKGFHIMISMSRNFRIFSVDLQAPGDSPNTDGIHMSKSDLVKISKT
VIATGDDCVSMIHGSTNISIKKVICGPGHGFSIGSLGHYDDEADVSGIIVKNCSLRETDN
GVRIKTYKTDSPSKASGIIFQDLIMTRVQNPIIIDQEYGNTKYSQPSKVRISDVHYINIR
GTSASKVAVDLLCSASNPCQGIHLDNVNLQYAGPPNDDMPFSSNCRNARVAYHGYQSPPP
CR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcggctttcgccattgttatgatggtgtgcttagttctcatccatggtggccaatgc
aagggtctttttaatgcagcagaggctttacataaagctaaagatgccgaaaatggtgac
gtcggtcccgatgttaaagctttcaacgtgttggattatggtgcaaagcctgatggaaag
acagatagttcaatcaattttagaaggactttcgaagctgcttgtaatttccatggagat
gcaatgatggtaatccctgaaggcgagttcttaatgggacctgttttattttcaggtcca
tgttccaatccatctttgttgattattcaagttaatggaattgttaaagctcaatctaat
atggcgtattatcgaggtggtggagacgatgatacggattggattacatttcaggccatt
gatggtttaattgtgtccggacgtggtactttccatggccaaggttcccaggtttggggt
ttcaatgactgtgccaggaagtcgaactgcgtccgcttgcccgctacattgaagttcatc
aaggtaaccgatgcgatgatccgtgggataaaatccattgaccccaaagggttccacatc
atgatcagcatgagtcggaattttaggattttcagcgttgatttgcaagcccccggtgat
agtcccaacaccgacggtattcacatgagcaaatcagacctcgttaaaatatcgaaaact
gtcatcgctacgggtgatgattgtgtctcgatgatccatggatctaccaacattagcatc
aagaaagtcatttgcggccctggtcatggtttcagcatcggtagccttggccactacgac
gatgaggcagatgttagcgggatcatcgtgaaaaattgctcattaagagagacggacaac
ggtgttagaatcaaaacatacaaaactgactccccaagtaaagcttcgggcataattttt
caagacctgatcatgactcgagttcagaaccccatcatcatagatcaagaatacggaaac
acgaaatacagtcagccatcgaaagtccgaatcagcgacgttcactatataaacatccga
ggaacttcagctagcaaagttgcagttgatctactttgcagcgcgtcgaatccttgccag
ggcattcacttagacaacgtcaacttgcaatatgccggtcctccaaatgacgacatgccc
ttcagttccaattgtcggaacgccagggtcgcttaccacggctaccaaagccctccgcct
tgccgttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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