KEGG   Gossypium hirsutum (upland cotton): 107939815
Entry
107939815         CDS       T04793                                 
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
ghi  Gossypium hirsutum (upland cotton)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small Clp_N AAA_5 AAA AAA_16 AAA_22 Sigma54_activat nSTAND3 IstB_IS21 AAA_14 AAA_25 NACHT AAA_7 bpMoxR AAA_18 Zeta_toxin AAA_28 Torsin
Other DBs
NCBI-GeneID: 107939815
NCBI-ProteinID: XP_016728689
UniProt: A0A1U8MT14
Position
A09:85221207..85227096
AA seq 946 aa
MEVLSSSSSSSLPINFRSRCLFSHPSSPSRFPSHFHPNDNNSVSSSTSSCFGLSISRSNS
FVHVKRFNSRRRSNRPLRISAVFERFTERAIKAIILSQREAKSLGNDMVFTQHLLLGLIG
EDRDPDGFLGSGLNIDEAREAVRSIWQTSNHDSDSGKQEGSIVSSTEVPFSASTKRVFEA
AVEYSRSMGYNFISPEHIAIGLFTVDDGNADQVLKRLGANVNHLATAAVARLQGELAKDG
REPPVLSKKMPEKSLSRNASGTRSPDKTKGESPLDQFCVDLTARASEGLIDPVIGRENEV
QRTIQILCRKSKNNPILLGESGVGKTAIAEGLAIRIAQAQIPAFLLNKRIMSLDVGLLMA
GAKERGELEARVTALLSEAIKSGEVILFIDEVHTLIGSGTVGRGNKGAALDIANLLKPAL
GRGELQCMASTTIGEYRTQFEKDKALARRFQPVWINEPSQEDAVGILLGLREKYESHHRC
KYTLEAINAAVYLSARYIPDRYLPDKAIDLIDEAGSRARIEAFRRKREQETDILSKAPDD
YWEEIRTVQAMHEVVLASRLKHCNGASNVDDSSEDLFKSQLPSASHDDEPIMVGPEEIAT
VASAWSGIPVQQITADERMLLVGLEEQLKKKVVGQDEAVAAISRAVKRSRVGLKDPDRPI
AAMIFCGPTGVGKTELTKALAACYFGSEDAMLRLDMSEYMERHTVSKLIGSPPGYVGYEE
GGMLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALVVMTS
NVGSSSIAKGRRASVGFLLNDDESASYTGMKALVMEELKTYFRPELLNRIDEVVVFRSLE
KSQMLEIVKLMLQEVKTRLMSLGIGLEVSESIKDLICEQGYDQTFGARPLRRAVTRIIED
PLSEALLAGEYKPGETAFIDLDASGNTVVSSPSDKVVTVSDTTPTY
NT seq 2841 nt   +upstreamnt  +downstreamnt
atggaggttttatcttcttcgtcttcttcgtctttgccgattaatttccggtcacgttgc
ttattttctcatccttcatcaccttcacgtttcccttcccatttccatccaaatgacaac
aattcagtttcttcttcaacttcttcttgttttggcctatcaatctctcgttccaatagc
tttgttcacgttaaacgcttcaattctcgtagaagaagcaacagacccttacgaatttct
gcagttttcgagcgtttcacagagcgagctatcaaagctattatcctttctcaaagggaa
gccaagtctctaggcaatgatatggttttcacccagcatcttttgctgggtttgatcggt
gaagaccgcgaccccgatggttttttagggtccggcttaaacattgatgaggctcgtgag
gctgtccgcagcatttggcaaactagtaatcatgattcggattcgggtaaacaagaaggg
tccattgtttcttcaacggaggtgccgttttctgcaagcacaaaacgggtttttgaggct
gccgtggagtattcgaggagtatgggttataattttatttcaccagagcatattgctatt
ggattgttcacggttgatgatggaaatgctgatcaggtccttaaaagattgggagcaaat
gtaaatcacttggcaactgcagcagtcgccagactgcaaggggagcttgcaaaagatggt
agggaacctccagtgttgtcaaaaaagatgcctgaaaaatctctctctcgtaatgcttct
ggcacgaggtcccccgacaagacaaaaggggaaagtcctctggatcaattctgtgtggat
cttacagctcgtgcaagtgagggactcattgatcctgttattggcagggagaatgaagtt
caaagaactattcagatactttgtcgcaagtccaagaataaccctattcttcttggtgaa
agtggagttggtaaaacagccattgctgaaggacttgcaatcaggattgcacaggcacaa
atcccagcatttttgttgaataaaagaataatgtccttggacgtaggacttctgatggct
ggtgcaaaggagaggggagagctggaggcacgtgttactgctttactaagcgaggcaata
aaatcgggtgaagtcattctatttattgatgaagtccacacacttataggatctggtaca
gtcggccgaggaaataagggagctgctcttgatattgccaatctattgaagcctgcactt
gggaggggtgaattacagtgtatggcatcaaccactattggggaatataggacccaattt
gaaaaggataaagcattagcgcgaagattccagccagtatggattaatgaaccaagccag
gaggatgcagtagggatactgcttggtctgcgtgaaaaatatgagtcccatcaccgctgc
aagtacactctggaagcaataaatgctgctgtgtacctgtcagcaagatacattcctgac
aggtatcttcctgataaagcaattgatctcattgatgaggctggaagtagagctcgtatt
gaagcatttaggaggaaaagagagcaagaaactgacattctctctaaggcacctgatgat
tattgggaagaaataagaactgtgcaggccatgcatgaagtggtcttggccagtaggttg
aaacattgtaatggtgcttccaatgtggatgattctagtgaagaccttttcaaatcccag
ttgccttctgcttcacatgatgatgaacctataatggtgggacctgaagaaattgcaaca
gttgcttcagcttggtcagggatccctgttcagcaaatcactgccgatgaaagaatgctt
ctagttggccttgaagagcaacttaagaaaaaggtcgttggtcaggacgaggctgttgct
gccatttctcgagctgtgaagagatctcgtgttggcctgaaggatccagatagaccaatc
gccgcaatgatcttttgtggtccaactggggttggaaaaactgagttaacaaaagcttta
gcagcatgctattttgggtcggaggatgctatgctaagattggatatgagtgaatatatg
gagcggcatacagtgagtaaactaataggatcaccccctggttatgtcggttacgaagag
gggggtatgcttacagaagctattagaagacgaccattcacgttgttattgcttgatgaa
atagagaaagcccatccagatatattcaacattcttctacaattgtttgaagatggccac
ctcacagattcacagggtcgaagagtatctttcaagaatgcattggtggtgatgacttca
aatgtgggttcttcttctattgcaaaaggtagacgtgcttccgttggcttcttgctcaat
gacgatgaatcagcttcatatactggaatgaaagctttggtaatggaagaactgaagaca
tatttccgtccagagttactcaacaggattgatgaagtggtcgtatttcggtctctagaa
aaatctcagatgcttgagattgtaaaactgatgttgcaagaggtgaaaacaaggctcatg
tcacttggaattggtttagaggtgtctgagtcaatcaaggacctcatttgtgaacaaggt
tatgaccagacctttggtgctcggccccttcggagggcggttaccagaataattgaagat
cccttgagtgaagctctcctggctggagaatacaagcctggcgaaacagcttttattgat
ctagatgcttcagggaacaccgtcgtttcaagtccatcagataaggtcgtcactgtgtct
gatacaacacctacctactag

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Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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