KEGG   Gossypium hirsutum (upland cotton): 107946297
Entry
107946297         CDS       T04793                                 
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107946297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107946297
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     107946297
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     107946297
 Prokaryotic type
     107946297
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 107946297
NCBI-ProteinID: XP_016736044
UniProt: A0A1U8NDZ3
Position
D12:48892410..48895888
AA seq 322 aa
MLLRFGSSLSSLKLHLYPHPHPHPHLISMAAKTITDFFNPNPAPAKRRKLSTSSDHQPFS
SLTPDQKSRIELNKCLAISKRNLKLCSQKVEGSGYVKLEELLVEDTWLQVLPGEFQKAYA
LNLCKFVEAELSSGAVPIFPPQHLIFNALNSTPFHRVKVVIIGQDPYHGPGQAMGLSFSV
PEGVKIPSSLANIFKELKQDLGCSIPLHGNLHKWAVQGVLLLNTVLTVRKQQANSHAKKG
WEQFTDAVIKTISQKKEGVVFLLWGNSAQEKSKLIDQTKHHILKAAHPSGLSANRGFFGC
RHFSCTNQLLEQMGTAPIDWQL
NT seq 969 nt   +upstreamnt  +downstreamnt
atgctcctccgttttggttcctcactcagctccttaaaactacatttatatccccatccc
catccccatccccatctcatatcaatggccgccaaaacaataactgatttctttaaccca
aacccagccccagccaagcggcggaaactctccacttcgtccgatcatcaaccattttcc
tctctcacacccgaccaaaaatctcggattgaattaaacaaatgccttgccatctcaaaa
cgcaatctcaaactctgttcccaaaaggttgaaggatcaggttatgttaagctggaggag
cttttggtggaggacacttggcttcaggtcttacccggagagtttcagaaggcttacgcc
ctcaacttgtgcaaatttgtggaggccgagttatccagtggcgccgtccctatttttcct
cctcagcacttaattttcaatgctctcaattctactccgtttcacagggtcaaagtagtt
atcattggtcaggacccatatcatggacctggtcaagcaatggggctttcattttcagtg
ccagagggagtaaagattccctcaagcctggcgaatatatttaaggaactcaagcaagat
cttggctgttcaattccacttcatgggaatctacacaaatgggctgttcagggtgttctt
ttgcttaacacggttctcactgtaaggaagcagcaagctaattctcatgcaaagaaaggg
tgggagcaatttactgatgctgttattaagactatctcacaaaagaaggaaggtgttgtt
tttcttctatgggggaactctgctcaagaaaaatccaaactgattgatcagacaaagcat
cacattctcaaggcagctcatccttctggtttgtctgcaaatagaggcttctttggttgc
aggcatttctcttgcacaaatcagcttttggagcaaatgggaactgcccctatagattgg
caactttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system