KEGG   Gossypium hirsutum (upland cotton): 107954946
Entry
107954946         CDS       T04793                                 
Name
(RefSeq) nuclear pore complex protein NUP133
  KO
K14300  nuclear pore complex protein Nup133
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107954946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107954946
   03036 Chromosome and associated proteins [BR:ghi03036]
    107954946
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107954946
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    107954946
SSDB
Motif
Pfam: Nucleoporin_N
Other DBs
NCBI-GeneID: 107954946
NCBI-ProteinID: XP_040953751
Position
D07:complement(52041397..52048986)
AA seq 1325 aa
MFSPGLKRSKLSSQKERNVGANLRAPDSPSTPLTENNKPAHQASIPDRPSTGTPAPWAPR
LSVLARIPPANKNDKGDGVDPIKPVFVGEFPQVVHDEQTSFLQRRVPADFCISGGMDKGT
CLSWIIYGNKIFIWSYLSFTAPKKCVILELPSDVLGNADLGRNSYLRNNWLLSVVNWDST
LKVTNRAAHHCYSAGIVLCNQKTRAVLYWSDIFADVGSAPVTICSSSDELLVTSSRIDSN
ATPNRHATNFTGSSYFNSLIASAIPGTQNACVALACCSSGELWQFYCSPNGIQVNKVHQN
IQSLSSQGTGVGQLVGSKGYPRSMIWRLPYFSVSDSNRQFFLLTDHEIHCFNIKLFPDLE
VSKLWSQEIVGNDGDLGIKKDLAGQKRIWPLDLQVDDHGKVITVLVATFCKDRVSSSSYT
QYSLLTMQYMSEVNMSSDLHERVLEKKAPIQVIIPKARVEDEDFLFSMRLRVGGKPAGST
IVLSGEGTATVSHYHRNSTRLYQFDLPHDAGKVLDASVLPPTDDGEDGAWVVLTEKAGIW
AIPEKAVVLGGVEPPERSLSRKGSSNEGSAQEERRNLMFANNIAPRRASSDAWDAGGRQA
TGLTGITRRTAQDEESEALLGQFFHEFLITGKVDGSLEKLKSSGAFERGGETNVFVRTSK
SIVDTLAKHWTTTRGAEIVAMGIISTQLMDKQQKHNKFLQFLALSKCHEELCSGQRHSLQ
IILEHGEKLSAIIQLRELQNAINQNRSTGVGSTHSSFENQVSGALWDLIQLVGERARRNT
VLLMDRDNAEVFYSKVSDLEQVFYCLERHLEYIISMEQPDGFQIHRACELSNSCVTIFRA
AMDYKNENHLWYPPPEGLTPWYCQPVVRNGLWSIASFMLQLLKETSEIDMSAKSELYSHL
EALAEVLLEASSGAINAKVERGEEHKGLLNEYWSRRDAILDSLYQQVKGFVEAGRQDLTD
STGENKEEILKNLSSSLLSIAKRHEGYQTMWNICCDLNDSGLLKNLMHESMGPRCGFSYF
VFKQLYGKKQYSKLLRLGEEFQEELSIFLNHYQDLLWLHEVFLHRFSAASETLHVVAISQ
DEGSISITEEEIDSDHSNPVPTLTDRRRLLNLSKIAAFAGKDADCQIKAKRIEADLKILR
LQEEIMEVLPMDDTNQHVDKKLLHPEELIELCLESGSKELPLQVFDVFAWTSSSFRKSHR
NLLEECWKKAADQDPWSELYQASVSEGWSDEETLQQLSRTILFKASNRCYGPKAETIEDG
FGEVLPLRQENVEVAGLKDARSSVEAILMQHRDFPYAGKLMLTALMLGCVQGDDVKLEES
LSPMV
NT seq 3978 nt   +upstreamnt  +downstreamnt
atgttctccccaggattgaagcgaagcaaattaagctcgcagaaggagagaaatgtaggg
gcaaatctaagggcaccagattctccatcaactccacttacagagaacaataaaccagcg
caccaagcttcgattccagatcgcccaagtaccggcactcccgctccttgggctcctcgc
ttgtctgttcttgctagaattccaccagcaaacaagaatgataaaggggatggggtggat
ccaattaagccagtttttgttggagagtttccacaagttgttcatgatgaacagaccagc
tttttgcagaggcgtgttcctgctgatttttgtatatcaggcggaatggataagggaaca
tgcctatcatggattatatacgggaacaaaatttttatctggagttatttgtcattcaca
gccccaaagaaatgtgttattcttgaacttccttctgatgttttaggaaatgcagatctt
ggcagaaattcctatctccgcaataattggttgctttctgttgtcaattgggatagcacc
ttgaaagtaacaaatagagctgcacaccattgctattctgctggtattgttttgtgtaac
cagaaaactcgagctgttttatactggtctgacatctttgctgatgtgggatctgctcct
gttaccatctgttcatcttctgatgaattattggtaacttcttcacgtattgacagcaat
gccaccccaaacaggcatgcaacaaattttactggctcaagttatttcaactctttgatt
gcttctgcaattcctggtacccaaaatgcctgtgttgcccttgcatgttgttctagtggt
gaactttggcaattttactgcagcccgaatggtatccaagtaaataaagtacaccagaac
atacaaagtttatcatcccaaggcactggtgttggtcaacttgttgggagcaagggatat
ccgaggtcaatgatatggcgtcttccatacttttctgtttcggactccaaccgccaattt
tttctgctgacagatcatgaaatacattgtttcaacatcaagctctttcctgatttagag
gtgtcaaagctttggtctcaggaaattgttggtaatgatggtgatttgggaattaagaag
gatctggctggacaaaaacgaatctggcctctagacctgcaggtggatgatcatggtaaa
gttattactgttctcgttgccaccttctgcaaggatcgggttagcagctcaagttacact
caatattctcttctgaccatgcaatatatgtctgaagtgaacatgtcctctgatttacat
gaaagagttttagagaaaaaggctccaatccaagtgataataccaaaagcaagggtagag
gatgaggacttcttattctccatgagacttcgagtagggggcaagcccgcaggatcaaca
atcgtactttctggtgaaggaactgcaacagtctcccattatcacagaaattctactcga
ctctatcaatttgatttgcctcatgatgctgggaaagttcttgatgcttcggttcttcct
cctactgatgatggggaagatggcgcatgggttgtgcttactgagaaagcagggatatgg
gcaataccagaaaaggctgttgtacttggtggggttgaaccccctgagcggagcttgtca
cgcaaagggagctcgaatgaaggctctgcacaagaagagagaaggaaccttatgtttgca
aacaatattgctcctagaagggctagttcagatgcatgggatgctggtggtagacaagca
actggtttgactggtattacacgcagaactgcccaagatgaagaatcagaagctttgctg
ggtcaatttttccatgagtttctgataactgggaaggttgatggatcactagaaaaactt
aagagttcaggggcatttgaaaggggtggagaaaccaatgtctttgtacggacaagcaaa
tcaatcgttgacaccttagctaaacactggacaactactagaggtgctgaaattgttgct
atgggtattatatcgactcagctcatggataagcagcagaagcataacaaatttctccag
tttcttgctttatccaagtgccatgaggagttatgttctggacagagacattctttgcaa
atcatcttagaacatggtgaaaagctctctgcaattattcaactcagggaactacagaat
gcaattaaccaaaaccgttcaactggagttggctccactcattcaagttttgaaaatcaa
gtttcaggtgctctttgggatctgattcagttagtaggggagagggccaggcgaaatact
gtccttctgatggacagagataatgctgaagtgttctatagtaaggtctctgatctcgaa
caagtattttattgcttagaaagacatctagaatatataatcagcatggaacaaccagat
ggatttcagatccatagagcttgcgaactctcaaattcatgtgttactatatttcgggct
gccatggactacaagaatgagaatcacctatggtatccaccaccagagggtttaacacct
tggtattgtcaaccagtggtgcgtaacgggctgtggagtattgcgtctttcatgcttcag
ctgttaaaagaaacatctgaaattgatatgtcagcgaaatcagaactatattctcatctg
gaagcattggctgaagttcttcttgaggcgtctagtggtgctataaatgctaaagttgag
cgaggagaagagcacaaaggtcttctgaatgagtactggagtagaagggatgcaattctt
gattccctttatcaacaagttaaaggttttgtagaagctggtcgtcaggacttaactgac
agcacaggagagaataaagaagaaatccttaaaaatctgtcttcaagcttgctgtcaata
gcaaaacgacatgaaggctatcagaccatgtggaacatatgttgtgatctcaatgattca
gggttgctcaaaaatcttatgcatgagagcatgggacctagatgtggattcagttacttt
gtgtttaaacagctgtatggaaagaagcagtactctaagctactaaggcttggggaggaa
ttccaggaagagctatctattttcttaaatcattaccaggacctcctatggcttcatgaa
gtattccttcatcggttttcagcagcttcagaaactcttcatgttgtggctatttctcaa
gatgagggctctatttcaatcactgaagaggagatcgattctgaccactcaaatccagta
ccaacattgactgacaggcggcgacttttgaacctctccaagattgctgcctttgcaggt
aaagatgctgactgtcagataaaagcgaaaagaatagaagctgatttgaagattttgaga
ttgcaggaagaaattatggaagttctacctatggatgacacgaaccaacatgttgacaag
aagctccttcatcctgaggagctgatagagctgtgtctcgaaagtggaagcaaagagcta
cctttgcaggtttttgatgtatttgcatggactagctcatcatttcgcaagagccatagg
aaccttttggaggagtgctggaagaaggctgccgatcaagacccttggagcgagctatat
caagcatcagtatccgaaggttggagcgacgaggaaactttgcaacaacttagccgaact
atccttttcaaggcttcaaacaggtgttatggtccgaaagcagaaaccattgaagatgga
ttcggtgaagtgctgccattgagacaagaaaacgtagaagtagccggtttgaaagatgca
cgatcatccgttgaggcaatattgatgcaacatagggatttcccatatgcaggtaagcta
atgcttactgccctcatgctaggatgtgtacaaggggacgatgttaaattagaggagagc
ctttccccaatggtatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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