KEGG   Gossypium hirsutum (upland cotton): 107955434
Entry
107955434         CDS       T04793                                 
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1
  KO
K06636  structural maintenance of chromosome 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107955434
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    107955434
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    107955434
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_29 ABC_tran DUF6236 Fez1 SbcC_Walker_B Laminin_II
Other DBs
NCBI-GeneID: 107955434
NCBI-ProteinID: XP_016746711
UniProt: A0A1U8P665
Position
A07:complement(95696543..95707138)
AA seq 1217 aa
MPSLTSPGKILRLELENFKSYKGLQTIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGGQLRDLIYAFDDREKEQRGRRAFVRLVYQLAGGSELCFTRSITSTGGSEYRIDSSV
VNVEEYNGKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEQISGSESVKNKYEEL
EELKARAEEKSALIYQRKRTIVMERKQKKEQKEEAEKHFRLQDELKSLKKEHYLWQLHNI
EKDIDKITDELDSEKKNREDVMHELEHFEAEAAKKKKEQAKYLKEIAQCEKRISERSIRV
DKSQPELLKLNEEMSRINSKIKSNRKELERKKEERRKHGDDIKELQKGIQDLTAKLEELN
EKXRDGTGKLPLLDSQLTEYFQIKEDAGMKTAKLRDEKELLDRQQHTDIEAQKNLEENLQ
QLRNREQELEAQEDQMRTRLKKILDTSAKQKDELAELKKELREMQDRHQKSRSKHENLKS
KIAEIENQLRELKADRHENERDARLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGRFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIERLRTLGGTAKLIF
DVIQFDPALEKAVLFAVGNTLVCDDLEEAKVLSWTGERFKVVTVDGILLSKSGTMTGGTS
GGMEARSNKWDDKKIEGLKKKKEQFESELEELGSIREMQLKESETSGRISGLEKKIQYAD
IEKKSIEDKLKNLKQEKKNIKDRIGHITPEIQKLKDVSDKRSKDIMKLEKRINEIVDRLF
KSFSQSVGVANIREYEENQLKAAQNMAEERLSLSNQLAKLKYQLEYERKRDVDSRIKKLE
SSISSLENDLKLVHKKXAEVKLATEKASEDINRWKEEVKEWKSKSEDCEKEIQEWKKQAS
AATTSISKLNRQINSKETQINQLDEWKGEIIEKCDLEHIELPLIADPMETESSNGKEFDF
SQLNRSLLQDRRPSDREKLEAEFKQKIDALVSEIERTAPNLKALDQYKTLQEKERDVTEE
FELARKEEKQVADEYNSVKQKRYELFMDAFNHISSNIDRIYKQLTKSGTHPLGGTAYLNL
ENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDA
ALDNLNVAKVAGFIRSKSCDGARTSQDSEIGSGFQSIVISLKDSFYDKAEALVGVYRDSE
RSCSRTLTFDLTKYRES
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgccgtctttgacttctccaggaaaaatacttcgcctagagcttgagaacttcaagtcc
tacaagggtcttcaaactatcggtcccttctccgacttcaccgccattattggaccgaat
ggggcaggcaagtccaatctcatggatgcaatcagcttcgttcttggagtccgaactggt
cagctacgtgggggccaactcagagacctaatatatgctttcgacgaccgtgaaaaggaa
caacgtggccgacgcgcatttgtgcgattagtttaccagcttgccggtggctccgaactc
tgtttcactcgttccatcactagtactggaggtagcgagtaccgtatcgacagcagtgtt
gtcaacgtggaggagtacaatggaaagttaagatcacttggtattctcgttaaggcccgg
aattttcttgtttttcagggtgatgtcgagtccattgcttcaaaaaatcccaaagaactg
acagggctgctcgagcagatttcgggctctgaatcagtaaagaacaaatatgaggagttg
gaagagctaaaagctagggctgaagaaaaatcagcgcttatttatcaaagaaagaggaca
atagtgatggagagaaagcaaaagaaagaacagaaggaagaagctgaaaagcacttccgc
ttgcaagatgagctgaaatctttgaaaaaggagcattatttgtggcaattgcataacata
gagaaggacattgacaagattactgatgaactcgactctgaaaaaaagaaccgtgaagat
gtgatgcatgagctagaacattttgaagctgaagcagctaaaaagaagaaggaacaggct
aaatacctaaaggagattgctcaatgtgaaaaaaggatctccgagagaagcattagagtt
gataaaagtcaacctgagcttctgaaattaaatgaagaaatgtctcgtataaattcaaaa
atcaagagtaatcgaaaggagcttgaaagaaaaaaagaagaaaggaggaaacatggtgat
gatataaaagaattacagaaaggcatacaggatctgactgcaaagttggaagagttaaat
gaaaaangccgcgatggcacagggaaactccctttgcttgatagtcaacttaccgagtat
ttccaaattaaggaggatgctgggatgaaaactgctaagttaagagatgagaaggagctt
ctcgataggcaacaacatactgatattgaagctcaaaaaaatttggaagaaaatctccaa
cagttgagaaatagggagcaagagttggaagcacaggaagaccaaatgcgaactagactg
aagaagattcttgatacctctgctaaacagaaggacgaacttgcagaattaaaaaaggaa
ctacgagaaatgcaagatagacatcagaagtccagatctaagcatgagaacctcaagtcc
aaaattgctgaaatagaaaatcagttacgtgagctgaaggctgatcgacatgaaaatgaa
agggatgctaggttgtctcaagctgttgagactctgaaacgcctgtttcaaggtgttcat
ggtcgcatgactgatctttgtagaccaacacagaagaagtacaaccttgcagtcactgtt
gccatgggcagatttatggatgctgttgttgtagaggatgaaaataccggaaaggaatgt
attaagtatttgaaagagcaaaggcttcctcctcagactttcattcctcttcaatcagtg
cgtgttaagccaatcattgaaaggttgcgcaccttaggtggcacagcgaagcttatcttt
gatgtgatccaatttgaccctgctttggagaaggcagttctttttgctgttgggaatact
ctagtttgtgatgatcttgaagaagccaaggttcttagctggactggagagaggtttaaa
gttgtaactgttgatgggattctactctcaaagtccggcacaatgactggtggtacaagt
ggtggaatggaagctaggtcgaataaatgggatgataagaaaattgaaggtttgaaaaaa
aagaaggaacaatttgaatcagagctggaagagcttggatcaattagagagatgcagcta
aaggagtctgaaacatctgggagaattagtggacttgaaaagaaaatccaatatgctgac
attgagaagaaaagcatagaagacaagcttaaaaacttgaagcaggagaagaagaatatt
aaggataggattggacatataactcctgagattcaaaagttaaaagatgtgagtgataaa
aggagcaaagacatcatgaagttggagaagaggattaatgaaattgttgatcgacttttc
aaaagttttagtcagtctgtaggggtggcaaacatccgtgagtatgaagaaaatcagctc
aaggctgcccagaatatggcagaagagaggcttagcttgagtaatcaacttgcaaagttg
aagtatcagttggagtatgagcgtaaacgagatgtagattcaagaattaagaagctggaa
tcttctatcagttccttggaaaatgatttaaaactggttcacaaaaagnaggctgaagtc
aagttggcaacagaaaaggcttctgaagatatcaatcggtggaaggaagaagtgaaggag
tggaaatccaagtcagaagactgtgagaaggaaattcaggaatggaagaagcaggcttct
gctgctacgacatccatatccaaacttaatcgccaaataaattctaaggagactcagatt
aatcaactggatgaatggaagggggaaatcattgaaaagtgtgacttagagcacatcgag
cttcctctcattgcagacccaatggaaactgaatcttcaaatgggaaggagtttgatttt
agtcagttaaatcgatcacttctgcaggatcgaaggccttctgatagggagaagcttgag
gcagaattcaaacaaaaaattgatgctctagtgtcggaaattgaaagaactgctcccaat
ttgaaggctcttgaccaatataagactcttcaagagaaggaaagagatgtaactgaagag
tttgaattagccagaaaagaggagaagcaagtagctgatgaatacaattcagttaagcag
aagagatatgagttgttcatggatgctttcaaccacatttctagtaatatcgataggatt
tacaaacagctaacaaagagtggtacgcatccattgggtgggacagcatatttgaactta
gaaaatgaggatgatccttttctacacggtatcaaatacacagctatgccgccaacaaag
cgcttcagggatatggaacaactatctggtggagaaaaaacagttgcagcacttgctcta
ctcttctccatccacagctacaagccttcaccctttttcatattggatgaagtggatgcc
gcattggataatctaaacgttgcaaaggtagctggattcatccgttcaaaatcatgtgat
ggagcaaggactagccaggacagtgaaattggaagcggtttccaaagtatagtgatatca
cttaaagatagcttttatgacaaggccgaggctttggttggggtttatcgggattcagag
aggagctgctcgagaactttaacgtttgacttgaccaaataccgagagtcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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