KEGG   Gossypium hirsutum (upland cotton): 107955938
Entry
107955938         CDS       T04793                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04145  Phagosome
ghi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107955938
   04145 Phagosome
    107955938
   04148 Efferocytosis
    107955938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107955938
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107955938
   04031 GTP-binding proteins [BR:ghi04031]
    107955938
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    107955938
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107955938
  Exosomal proteins of other body fluids (saliva and urine)
   107955938
  Exosomal proteins of colorectal cancer cells
   107955938
  Exosomal proteins of bladder cancer cells
   107955938
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    107955938
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 nSTAND3 PduV-EutP AAA_7 Septin cobW AAA_24 NTPase_1 AAA_22 ATPase_2 SRPRB Flo11 MCM NACHT TniB AAA_14 AAA_5 ATP-synt_ab
Other DBs
NCBI-GeneID: 107955938
NCBI-ProteinID: XP_040964182
Position
D12:complement(3657841..3660595)
AA seq 206 aa
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLVQASPSDPENFPF
VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGVNVEEAFQCIAKNALKSG
EEEEIYLPDTIDVASSSQPRSTGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgccatctcgtcgtagaacccttttgaaggtcatcatcctcggcgatagcggggtaggg
aagacgtctttgatgaatcaatatgttaataagaagtttagcaatcagtataaggcaaca
attggggctgattttttgacaaaggaagtgcagtttgaggataggcttttcaccttacag
atctgggatactgctggccaggaaagattccagagcttaggtgttgctttctaccgtggt
gccgattgctgtgttcttgtatatgatgtcaactcaatgaaatcatttgacaaccttaac
aactggagagaagagttccttgttcaggcaagcccttcagatccagagaatttccctttt
gttgttttgggaaacaaagttgacgtggatggtggaaacagtagagtggtgtccgagaaa
aaggctcgagcatggtgtgcctcaaaaggaaacatcccatattttgagacctctgctaag
gagggagttaatgtggaagaagctttccaatgcatagcaaagaacgcgctgaagagcggt
gaagaggaagaaatatatttgcctgacaccattgacgtggccagcagcagccaaccaagg
tcaactggatgtgaatgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (26)   
   Pfam (26)   
All databases (42)   

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