KEGG   Gossypium hirsutum (upland cotton): 107959529
Entry
107959529         CDS       T04793                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107959529
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    107959529
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107959529
   03036 Chromosome and associated proteins [BR:ghi03036]
    107959529
Protein phosphatases and associated proteins [BR:ghi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107959529
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107959529
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107959529
SSDB
Motif
Pfam: B56
Other DBs
NCBI-GeneID: 107959529
NCBI-ProteinID: XP_016751095
UniProt: A0A1U8PIT4
Position
A05:complement(27515210..27517486)
AA seq 462 aa
MGIRRDSPKNSPSKKTTLKHLFDLDPKPYVGSPLPSPRRGGGGTDCEHDGILSAISYCNS
VFTFTDPQESPSQQDLKRLKLMDVVSLLKSPKKPLQEQLLSPLMSMVSVNLFRPLPPPSK
TSIVSALPDDEELSTFTPLWPHLQLVYDILLRLVLNVDSKKLKDYIAHQFIRNLLYLFQS
EDPRERESLKNVFHRIYSRFTSYRSFMRKAMNDVFLHYVFETEKHCGIGELLEIWGSIIN
GFGVPLKEEHKLFLMRVLLPLHKPKGLQVYHRQLAYCVSQFVQKEPALGGVVVRGILRYW
PITNCHKEVLLIGELEELVENIDPDQYRTLALPLCSRITRCFNSCNSQVAERALYVWNNE
QFVKMASEAMEEVFPVVVEGMEKNLKLHWSKSVKQLTENVKAMLEEMDPPLYDKCLREIH
HRESEAHREQVKRQQKWDQIETAAAKHSHFLQPTKTICVSSH
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggcattcggagggattcccccaagaactcacccagtaagaaaactactctcaagcat
ctctttgatcttgatcccaagccttatgtcggaagtccccttcccagtccccgccgtggt
ggtggtggtactgattgcgagcacgatggaatcctgtctgctatctcttattgcaactcg
gttttcactttcaccgaccctcaggaatcgccttctcagcaagatctcaagcgccttaag
cttatggatgttgtctctctgctcaaatcaccaaagaagccattgcaagaacagcttttg
tcacctctaatgtccatggtgtctgtcaatctcttcaggccacttcctccaccttccaaa
acttccatcgtctctgccttgcctgatgatgaagaactctccactttcacacctctatgg
cctcacttgcagcttgtttacgatattctccttaggcttgttcttaacgtggattccaag
aaacttaaagattacatcgctcaccaattcattcggaatcttctttacttgtttcaatcc
gaagaccccagagaaagagagagcttgaagaacgttttccatcgtatatattcgaggttc
acttcatacagatcgtttatgaggaaagctatgaacgatgtgttcttgcattacgttttc
gagaccgaaaagcattgtgggatcggcgagctgctagagatatggggaagcatcattaat
ggcttcggtgttccgttaaaggaagagcacaagcttttcttgatgagagtgctacttccg
ttgcataagcctaagggtctgcaggtttaccatcggcaactggcctattgcgtttctcag
ttcgtgcaaaaagagcctgcacttggaggagtcgtggttagggggattttaaggtactgg
cccatcactaattgtcacaaagaagttctacttattggcgaattggaggagctcgttgag
aatatcgatcccgatcagtaccgaacgttggctttgccgttatgctctcgaattacgcga
tgtttcaacagttgcaactcacaggtagcagagcgagcactgtatgtgtggaacaacgag
cagttcgtgaagatggcatcggaagccatggaagaagtgtttcctgtggtagtggaaggc
atggagaagaacctaaagctgcattggagcaaaagcgtaaagcaactaacggaaaatgtg
aaggccatgttggaagaaatggatccacccttatacgataagtgcctccgagaaatccat
caccgggaatccgaagctcatcgtgagcaagtcaagcgccaacagaaatgggatcaaata
gaaacggctgcagctaagcacagccacttccttcaaccaacaaaaaccatatgtgtttct
tcccactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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