KEGG   Grimontia hollisae: AL542_13115
Entry
AL542_13115       CDS       T04260                                 
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
  KO
K03977  GTPase
Organism
gho  Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:gho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gho03009]
    AL542_13115 (der)
Ribosome biogenesis [BR:gho03009]
 Prokaryotic type
  GTPases
   AL542_13115 (der)
SSDB
Motif
Pfam: MMR_HSR1 FeoB_N KH_dom-like GTP_EFTU Dynamin_N AIG1 RsgA_GTPase AAA_22 cobW Roc Ras PduV-EutP Nuc_deoxyri_tr2 TniB SRP54 SRPRB DUF4350
Other DBs
NCBI-ProteinID: AMG31202
Position
1:2043969..2045474
AA seq 501 aa
MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKALLGEHEFIVVDTGGI
DGTEEGVETKMAEQSLAAIEEADVVLFMVDGRAGLTVADEAIAQHLRSRQKKTFLVVNKV
DGIDPDAASAEFWQLGMEEMYQIAAAHGRGVLALIDRALKPFAEELAGNEEDDGKEGLVD
LTGEQDEDKDEKDLTEEDAESALERLRNLPIKFSIIGRPNVGKSTLTNRILGEERVVVYD
MPGTTRDSIYIPMERDGREYVIIDTAGVRRRKRVNDKVEKFSVVQTLKAIEDANVVLLVI
DARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDSDVKERVKSELDRRLGFVDFARIHF
ISALHGTGVGHLFESIQEAYESATRRISTSMLTRIMKMAQDDHQPPMIRGRRVKLKYAHA
GGYNPPIIVIHGNLVRELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKKEKLT
ISQARQRKRLMDMVKNRSKKS
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgattcctgtcgtagccctggttgggcgtcctaatgtggggaagtcgacactctttaac
cggctgacaaggacgcgcgatgcgctcgttgccgattttccaggtttgaccagggatcgt
aaatacggaaaagcgttactgggtgaacacgagtttattgttgttgacaccggcggtatt
gacggcaccgaagagggtgtagaaaccaaaatggcggaacaatcgcttgcggcgattgaa
gaagcagatgtggtgctgtttatggtggatggccgcgcaggcctgacagtagccgatgaa
gcgattgcccagcaccttcgcagtcgccagaaaaaaacgttcttggtggtaaacaaagtt
gacggtattgatccggacgctgccagtgcggagttttggcaattgggtatggaagagatg
taccagattgcagcggctcatggccgtggtgtactggcattgattgatcgcgccctgaaa
ccgtttgccgaagaattggccggtaatgaggaagatgacggtaaagaaggtctggttgac
cttaccggagagcaggacgaagacaaagacgagaaagatctgacggaagaagatgcggaa
tctgcgttggaacgtctgcgtaacctgccgattaaattcagtatcattggccgcccaaat
gtgggtaagtcaacactgaccaaccgcattctgggtgaagagagggtggtggtctatgac
atgccggggaccacgcgcgattctatttatattccaatggaacgtgatggtcgcgagtac
gtcattattgatactgcgggtgtccgtcgccgtaagcgcgtgaatgacaaagtggagaag
ttctcggtcgtccagacactgaaagcgattgaagatgcaaacgtagtgcttctggttatc
gatgcgcgtgagaacatttccgatcaggatttgagcctgctgggttttgcattgaatgca
ggccgttcaatcgttattgcggtgaacaagtgggacggtctggacagcgacgtcaaagag
cgtgtgaagtcggagcttgaccgccgtcttggctttgtggattttgcccgtatccacttt
atctcggcattgcacggcaccggtgtcggtcacctgtttgagtcaatccaggaagcttat
gagtcagcgacccggcgtatcagcacctcgatgctgacccgtattatgaagatggcgcag
gatgatcatcagcctccgatgatccgaggtcgacgcgtgaagctgaaatatgcacacgcg
ggtggttacaacccgccgattatcgtgatccacggtaacctggttcgtgaactgccagat
tcatacaaacgctatctgatgaactactaccgtaaatcactggaaatcatgggaacaccg
atccgcatccagttccagaacagtgagaacccgtttgagggcaagaaagagaagctgacc
atttctcaggcacgtcaacgcaagcgactgatggacatggtaaaaaaccgcagcaagaag
tcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (28)   

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