KEGG T05370: C6V83

Gordonia iterans: C6V83_01400

Entry

C6V83_01400       CDS       T05370

Name

(GenBank) CCA tRNA nucleotidyltransferase

K00970

poly(A) polymerase [EC:2.7.7.19]

Organism

git Gordonia iterans

Pathway

git03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:git00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C6V83_01400
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:git03019]
    C6V83_01400
Enzymes [BR:git01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     C6V83_01400
Messenger RNA biogenesis [BR:git03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     C6V83_01400

SSDB

Motif

Pfam:

PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 Cas3_HD

Other DBs

NCBI-ProteinID:

AVL99149

UniProt:

A0A2S0KBV8

Position

complement(308795..310321)

AA seq 508 aa
MTDRLGAYRAGADNTDVASTAQARAERRVRLLAAAAVGLRDLGDVLTPVAQRFAERGHEL
YLVGGSVRDAVLGRLGNDLDFTTDARPEVIAEILREWAGTVWDTGIEFGTVSAAKSGHTV
EVTTFRADVYDRVSRNPQVTFGDTLEDDLIRRDFRINAMAVKLAADGSQEFCDPLDGMDD
LLAGVIDTPAAPEDSFGDDPLRMLRGIRFVSQLGFELSPRTVAAITAMAGEIERITAERI
QVELDKLICGEHPIEAVDLLVETGLADRIIPEIPGMKLTIDEHHQHKDVYQHSLTVLRQA
IDLETDGPDPVLRWAALLHDIGKPATRRFEEGGGVSFHHHEVVGAKMTRKRLRALKFSKA
RVEDVAQLVFLHLRFHGYGEGRWSDSAVRRYVTDAGPLLDRLHKLVRADCTTRNRRRARK
LQETYDDLEKRIAALQEAEDLDRIRPDLDGNAIMELLGLSPGPEVGQAWKYLKELRLDSG
PLSREEAEAALLQWWAQRTSGPSRRRLD

NT seq 1527 nt +upstreamnt +downstreamnt
atgaccgatcgtctcggggcgtaccgcgccggcgccgacaacaccgatgtcgcttcgacc
gcgcaggcccgggccgaacggcgggtgcggctcctcgccgccgcggccgtcggcctccgc
gatctgggtgacgtcctgacgccggtcgcacagcgtttcgccgagcggggccacgagttg
tacctggtcggcggcagcgtgcgcgacgctgtgctcggccgcctcggcaacgacctcgac
ttcaccaccgacgcgcggccggaggtgatcgccgaaatcctgcgggagtgggccggcacg
gtgtgggacaccggcatcgagttcggcaccgtcagcgcggcgaagagcggccacacggtg
gaagtcaccaccttccgcgccgatgtctacgaccgcgtctcgcggaatccgcaggtcacc
ttcggcgacaccctcgaagacgacctgatccgccgggacttccgcatcaacgccatggcg
gtgaagctggccgccgacggctcgcaggagttctgcgatcccctcgacggcatggacgac
ctgctggccggggtcatcgacactccggcggcgccggaggactccttcggggacgatccg
ttgcgcatgctgcgcggcatccggttcgtctcccagctcggattcgagctgtcgccgcgc
accgtcgccgcgatcaccgcgatggccggtgagatcgagcggatcaccgccgaacgcatc
caggtggagctggacaaactgatctgcggcgagcacccgatcgaggcggtcgacctgctg
gtggagacgggtctggccgatcggatcatccccgagatcccggggatgaagctcacgatc
gacgagcaccatcagcacaaggacgtgtaccagcattccctgactgtgctgcgccaggcg
atcgacctggagaccgacggccccgacccggtgctgcgctgggcggcacttctgcacgac
atcgggaagcccgccacccgtaggttcgaggagggcggcggcgtcagctttcaccaccac
gaggtggtcggcgccaagatgacccgcaagcgactgcgcgcgctcaagttctccaaggcg
cgcgtggaggacgtcgcgcagctggtctttctgcacctgcggttccacggatacggcgag
ggccggtggagcgactcggcggtgcggaggtacgtcaccgacgccgggccgctgctcgac
cggctgcacaagttggtgcgcgccgactgcacgacgcggaaccgtcgtcgtgcccggaag
ctgcaggagacctacgacgacctggagaagcgcatcgccgcgctgcaggaggcagaggac
ctcgaccggatccgccccgacctggacggcaacgcgatcatggagctgctcgggctgtcg
ccgggtccggaggtcgggcaggcgtggaagtacctcaaggaactgcgtctggattcgggg
ccgctgagccgcgaggaggccgaagcggccctcctgcagtggtgggcgcagcgcacatcc
ggcccgagccgacgtcgactagattga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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