KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107115159
Entry
107115159         CDS       T04299                                 
Symbol
GRIN1
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 1
  KO
K05208  glutamate receptor ionotropic, NMDA 1
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04020  Calcium signaling pathway
gja04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:gja00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    107115159 (GRIN1)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    107115159 (GRIN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:gja04040]
    107115159 (GRIN1)
Ion channels [BR:gja04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   107115159 (GRIN1)
SSDB
Motif
Pfam: Lig_chan ANF_receptor Lig_chan-Glu_bd SBP_bac_3 Ion_trans_2 DUF6724 Peripla_BP_6 Rap-GAP_dimer
Other DBs
NCBI-GeneID: 107115159
NCBI-ProteinID: XP_015272270
Position
Un
AA seq 941 aa
MSAMRLLLLAVLVSFSFARAGCEPKIVNIGAVLSTKKHEQVFREAINQANKRHGTWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRYYKWNHIILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLEQLSFDNKRGPKAEKVLQFEPGTKNVTSLLLEAKELEARVI
ILSASEDDATTVYTSAAKENMTGPGYVWLVGEREISGNALRHAPEGLIGLQLMNGKNESA
HIRDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMQTKYAEGVTGRVE
FNEDGDRKYANYSVMNLQNNKLVQVGVYNGSHFLPNDRKIIWPGGETETPQGYEMSTKLK
IVTIHQEPFVYVKPTMSDGKCKPLLNSTGGLVQQVLCTGPNETMPGRPSVMLCCYGFCID
LLIKLAKTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILNLHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFR
SFTSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgagcgcgatgcgcctcttgcttctcgctgtgctcgtctccttctcgttcgcccgcgcc
ggctgcgagcctaaaatcgtcaatatcggcgcggtgctgagcaccaagaaacatgagcag
gtcttccgcgaggccatcaaccaggccaacaagcgccatggcacctggaagatccagctc
aacgccacctcggtcacgcacaagcccaatgccatccagatggccctgtccgtctgcgag
gatcttatctccagccaggtctatgccatcttggtgagccacccaccagctccaaatgac
cacctaacaccaacgcctgtgtcatacacagccggcttctataggatccctgtcattggt
ctgacaacacgcatgtctatatattcagataagagtatccacttatctttcctgcgtact
gtccccccctattcccaccagtccaatgtctggtttgaaatgatgcgctattataagtgg
aaccacatcattctaattgtcagcgatgatcatgaggggcgggctgcgcaaaagaaacta
gaaaccctcttggaagaaaaagaatccaagagtaaaaaaaggaactatgaaaacctcgaa
caactatcctttgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaacct
ggaacaaaaaatgtgacttcactgctactggaagctaaagaactggaggcccgggttatt
atcctctctgcaagtgaggatgatgctacaactgtgtacacatcggcagccaaagaaaac
atgactggtccaggctatgtgtggctggtaggggaaagggagatctcaggcaatgcccta
cgccatgcaccagaaggactcattggtttgcagctcatgaatgggaagaatgagtctgct
cacatcagagatgcagtggctgtggtggcccaggctgtccatgacttgtttgagaaagag
aacatcacagatccaccaaggggctgcgtgggaaacaccaacatctggaagacggggcct
ctgttcaagagagtgctgatgcagaccaaatatgcagaaggtgtgactggacgggtggag
ttcaacgaagatggagaccggaaatatgccaattacagtgtcatgaatctacagaacaat
aaactggtgcaagttggagtttacaatggtagccacttcctgcccaatgaccggaaaatc
atctggcctggaggagaaacagagacaccacagggctatgaaatgtctacaaaattaaag
attgtgacaatccaccaagagccctttgtctatgtgaaaccaaccatgtcagatggaaag
tgcaaaccactgctcaacagtactggggggctggtgcagcaggtcctttgtactgggcct
aatgagactatgccaggacgccccagtgtgatgctgtgttgctatggcttctgtattgac
ttactgatcaagcttgctaagacgatgaattttacctatgaagttcaccttgtagctgat
ggtaaatttgggacccaagagcgggtgaacaacagcaacaagaaagagtggaacgggatg
atgggggagctgctgagtggccaggctgacatgattgtggctccactgactatcaacaac
gagcgagcgcaatacattgaattctccaagcctttcaaataccagggactcaccatctta
gtcaaaaaggaaattccccgcagcacactggattcattcatgcaaccattccagagcact
ttgtggcttttggtggggctctcggttcatgtagtggctgtgatgttatatctcctcgac
cggttcagcccgtttggacggtttaaagtgaatagtgaggaagaagaagaggatgccctg
acactctcttctgctatgtggttctcctggggagtccttctgaactctggcattggagaa
ggtgctccccggagtttctccgctcgaatccttggaatggtgtgggctggatttgctatg
attattgtggcctcgtatactgccaacctggctgccttcctggtgttggacagacctgag
gaacgaatcacgggcattaatgatcccaggttgcgaaacccctcggataagttcatatat
gctacggtgaagcaaagttcggtggacatttacttccgccgtcaggtggagctaagcacc
atgtaccgccacatggagaaacacaactatgagagtgctgcagaagccatccaggccgtc
agggataacaagctccatgcattcatctgggattcagctgtgctagaatttgaagcatca
cagaagtgtgacctggtgacaacaggggagttattcttccgctctggcttcggcatcggg
atgcgcaaggacagcccttggaagcagaacgtctccttggccatcctcaacctccatgag
aacggcttcatggaagagcttgacaagacttgggtgaggtatcaggagtgtgattcccga
agtaatgctccagcaactctcacctttgagaacatggcaggtgtattcatgctggtggct
ggaggtattgtggccgggatatttttaatattcatagaaatagcttacaaaaggcataaa
gacgcacggaggaagcagatgcaactggcgtttgcagccgttaatgtgtggcggaaaaac
ctgcaggatagaaaaagtggtagagcagaaccagaccctaaaaagaaagccacttttagg
tccttcacctctaccctggcctccagcttcaagagacgtaggtcctccaaagacacgcag
tatcatcccactgacatcactgggcagctcaacctctccgacccctcggtcagcaccgtg
gtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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