KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107117333
Entry
107117333         CDS       T04299                                 
Symbol
VARS2
Name
(RefSeq) valyl-tRNA synthetase 2, mitochondrial
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    107117333 (VARS2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:gja01007]
    107117333 (VARS2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gja03016]
    107117333 (VARS2)
Enzymes [BR:gja01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     107117333 (VARS2)
Amino acid related enzymes [BR:gja01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   107117333 (VARS2)
Transfer RNA biogenesis [BR:gja03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    107117333 (VARS2)
 Prokaryotic type
    107117333 (VARS2)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 tRNA-synt_1g tRNA-synt_1_2 tRNA-synt_1b tRNA-synt_1e
Other DBs
NCBI-GeneID: 107117333
NCBI-ProteinID: XP_015274914
Position
Un
AA seq 1084 aa
MPSAQLNSSTSRRLHSLCRLLLSKKRSWEVPGGWKAYSQANKPDPSKQAGKTSHLKNRAE
KQKRQRERMESIEVRMATGLKKELPRQTKTLALKSEVLYDIPTEAGEKKDTSGPLPASYS
PRYIEDAWYAWWVKEGFFKPEYQHQLPHQKPEVFSLSIPPPNVTGSLHLGHALTVAIEDA
VVRWKRMEGCQVLWVPGSDHAGIATQAVVERKIWKERGALRQDLTRKEFLQEVWNWKEEK
GNEILQQLKVMGASLDWDRACFTMDSDFNQAVTEAFVRLHEEGLIYRDRQLVNWSCALRS
AISDIEVENRQLEGWTELSVPGVPGKVPFGVLVTFAYEVEGEEGEELPVATTRPETMLGD
VAVAVHPDDLRYTHLHGKRLRHPFTGQLLPIITDPSVEQDVGTGAVKITPAHSRIDYELG
RRHGLPVVSVIAEDGTMTAECGKWLQGENRFLAREKVLAALKERGLYRDVKEHAMVLPLC
SRSGDVVENLLKSQWFVRCEAMAHRALEAVESRHLKLIPEFHEKNWRTWLSKISDWCISR
QLWWGHQIPAYRVTIPQSLDTGKEGSDELWVVGRTKAEAREKAADMLGEPEEDLKLVRDE
DVLDTWFSSALFPFASLGWPRQTGDLQQFYPNSLSETGSDLLFFWVARMVMLGEQLTGKL
PFSQVFLHPMVRDAHGRKMSKSLGNVIDPLDVIHGASLQDLQEKLQKSNLDPREVAIAME
GQQQDFPGGIPELGTDALRFALCSYSTQGDGINLDVAAVENASRFCNKVLNAMKFTLAAL
GEGFTPLTPEEFFPSSPMDRWILSRLYHTAQECTQRFEKFELHFVTTAVHIFWLHDFCSV
YMESIKPILSSRDPARLLSTRQTLYSCTDLALRLLSPFMPYLTEELWQRLPKVDTASPPS
ICVARYPNTEYLAHWSHPEEEANFLLVQEIIKAVRYLRSKYQLTKARPITYVVCPELAVR
EVYENYQEPLQTLSFAGSLRFFLDPEKAELPVGCVAAKANNHTDIYVDLQGLVDPQKELL
KLRSEQQKLEQQLTGLTIRVQGARYQEQVSLKAKARLQQKISSLHLELEQVKQATETFQK
MAAR
NT seq 3255 nt   +upstreamnt  +downstreamnt
atgccatcagcccagcttaattccagtaccagccggaggctacattctctctgccgtctg
cttctttccaagaagagaagctgggaggtgcctggtgggtggaaagcatattcccaagct
aataagcctgatcccagtaaacaggcaggtaaaacgtctcatctgaaaaaccgggcggag
aaacagaagcggcaacgggagaggatggaatccattgaagtcaggatggcgacaggcctg
aagaaagagcttccaaggcaaaccaagaccttggctttgaaaagtgaagttctgtatgac
atccccacggaagctggagaaaagaaagatacctcggggccactgcctgcctcctatagc
ccacgctacattgaagatgcttggtatgcttggtgggtgaaggagggattttttaagccg
gaataccagcatcagttgccccatcagaaacccgaagtgttctctctctccatccccccg
ccgaatgtcacggggtccctgcacttgggtcatgctttgactgtagctattgaagatgct
gtggtgcggtggaagaggatggaaggctgtcaagtgctgtgggttccaggttcagatcat
gctgggattgccactcaggctgtggtggaaagaaaaatctggaaagaacggggggccctt
cgccaagacctgacacgaaaggaattcctgcaggaagtctggaactggaaagaagagaaa
gggaatgaaatactccagcagctgaaggtgatgggagcatcgttagactgggaccgggcc
tgtttcaccatggattctgatttcaaccaagctgtgactgaggcctttgtgcgtctacac
gaggagggtctgatctatcgggacagacagctggtcaactggtcatgtgccttgcggtcc
gccatttctgacattgaggtggagaacaggcagcttgagggatggaccgagctctctgtt
ccaggggtcccgggcaaagtgccattcggagtcttggtgacgtttgcttacgaagtagaa
ggggaggaaggcgaggaacttcctgtggccacgacccgcccagagaccatgttgggggac
gtggctgtcgctgttcacccagatgatctccgatacacgcacctgcatggcaagagactc
cgccacccattcactggacagctccttcctatcattactgatccctcggtggagcaggac
gtgggcacaggagctgtgaagataacaccagcacacagccgtattgactacgaactgggg
cggaggcatggccttcctgttgtttctgtcatcgcggaggatggaacaatgaccgctgag
tgtgggaaatggcttcagggggagaacaggttcctggccagagagaaggtgctggctgct
ttgaaagagagaggcctgtatcgggatgtgaaggagcatgccatggtgctccctctttgc
agccgctctggggatgtggttgaaaacctcctgaagagccagtggtttgtccgatgtgaa
gccatggctcatagagcattggaggctgtggaatccagacatttgaaactcattcctgaa
tttcatgagaagaattggaggacttggctttcaaaaatcagtgactggtgtatctcccgc
cagctgtggtggggccatcaaattccagcctatcgagtcaccattccacagtcacttgat
acagggaaggaggggagtgatgaattatgggtagtgggcaggacaaaagcagaagctcgg
gaaaaagcagcagacatgttgggagaaccagaagaggacctgaagcttgtgagagatgag
gatgtcttggacacgtggttctcatctgctctcttccctttcgcctcactgggatggcct
cgtcagactggagacctccagcagttctaccccaacagcctctcggagacaggaagcgac
cttctgttcttctgggtggcccgaatggtgatgctgggagaacagctaactgggaaacta
cctttctctcaggttttccttcacccgatggttcgtgatgctcatgggaggaagatgagt
aaatctctagggaatgtgattgaccccttggatgttattcatggggcctctttgcaggac
cttcaagagaagctgcaaaagagcaacttggacccaagggaggtggccattgctatggaa
ggccagcagcaagattttcctggagggatccctgagcttggcactgatgctctaaggttt
gccctctgctcttattccacacaaggtgatggcattaacttggatgtggctgcagtggag
aatgccagtcgtttctgcaacaaggtcttgaatgccatgaaattcacgttggcagccctg
ggagaagggttcaccccactgacgccagaggagttcttccccagttctcccatggaccgg
tggatccttagccgcctctatcacacagcgcaagaatgcacccagcggtttgaaaaattt
gagctgcatttcgtcaccaccgccgtccatattttctggctgcatgatttctgcagtgtc
tacatggagtccattaaacccatattatccagtagggatccggctcgtctcctctcgacc
cgccagaccttgtacagctgcacggacttggccctgcgcctcctgtctccattcatgccc
tacctgacagaggagttgtggcagcggcttcccaaggtggacacagcatcccctcccagc
atctgtgtggcaagataccccaacaccgagtatctggctcactggagtcatcctgaggaa
gaggcaaacttcctgttagtacaggaaatcatcaaagcagtgcgctatctgaggtcaaaa
taccagcttaccaaagctcggccaataacatatgtggtctgcccagagttggctgttcgt
gaggtgtatgagaactaccaggagccattgcagactctgtctttcgctggttctctgaga
ttcttccttgatccggagaaagcagaactacctgtgggctgcgtagccgcaaaggcaaac
aaccacaccgatatctacgtagatcttcagggactggtcgaccctcaaaaggagctcctt
aaactgagatctgagcaacagaaactggagcagcagctgacaggcctcaccataagggtt
caaggggccagataccaggagcaggtctccctgaaagccaaagcacgcctccagcaaaag
atttcctctctacatttagagctggaacaggtaaaacaggccacagaaacctttcaaaag
atggctgcgagatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (51)   

Download RDF
DBGET integrated database retrieval system