KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107123061
Entry
107123061         CDS       T04299                                 
Symbol
IFIH1
Name
(RefSeq) interferon induced with helicase C domain 1
  KO
K12647  interferon-induced helicase C domain-containing protein 1 [EC:3.6.4.13]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04622  RIG-I-like receptor signaling pathway
gja05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gja00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    107123061 (IFIH1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107123061 (IFIH1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:gja04054]
    107123061 (IFIH1)
Enzymes [BR:gja01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     107123061 (IFIH1)
Pattern recognition receptors [BR:gja04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   107123061 (IFIH1)
SSDB
Motif
Pfam: RIG-I_C-RD CARD_2 RIG-I_C DEAD Helicase_C ResIII SWI2_SNF2 CARD SNF2-rel_dom AAA_19 DUF3638 DUF4428
Other DBs
NCBI-GeneID: 107123061
NCBI-ProteinID: XP_015281719
Position
Un
AA seq 998 aa
MATAPSRDETILYLVSCFRPKIRRGLQVVQVLDYMPCLSREVKEHVRTVCDNQGNIAAAD
ELLRALEDAPRRPPGLCLEFYDALRRGGFRAAAYLNPSLDELPTPSLEEVHETGTQLLEI
FMGSLVENLRAVQVAEKCVAQRLFNGEDFERVRTLHDARGNQEAVRELLSRIERKRKWFS
PFLAALRDAHHEKIADELNGEETEYNENGLSADKTEELRGSAAVGEVKKGTDMEPSSSGE
ENASEEFWEASAVSESDVSLLDASVDDTNESLGQVSFGGDSDDVDDGDKRSSPEPELSLR
DYQMEVAKPALEGKNIIICLPTGSGKTRVAVYIAKHHLDEKREEKKTGKVIVLVNKVPLV
EQHFRKEFHLYLKHQYRVAKLSGESQLKILFPRVVQNNDVIICTAQILENALLNADRDPE
EGVRLAEFSLIIIDECHHTHKEGVYNNIMRRYLKEKRQNKKQSNSWLPQPQILGLTASPG
VGGAKNPSKAEEHILKICANLDAERIMTVKEHAQQLSNQVKEPYKKFEIADDKRQDPFKE
KLISIMTEIQSYCKFNPRCEFGSQTYEQWVVQEEKKAAKEKNRKERVCAEHLKKYNDALQ
INDTIRMIDSYEHLKSFYQEEKNKKMAVNEEEDEPLPLKLEETDKFLIGLFYGKEKLMKE
LASKEQYENEKLVKLRSTLMVEFSKTFEPRGIIFTKTRQSAYALYQWIKENPKFEDLGVK
AHYLIGAGHNSEFKPMTQNEQKEVIEKFRRGEVNLLIATTVAEEGLDIKECNIVIRYGLV
TNEIAMVQARGRARAEESTYVLVASDGSGAVERENVNIFREKMMYKAIRRVQEMTPNEYF
RKIEGFQLQSKREVRMKAKKQERKVYKQNPSFIKFLCKNCQKEICSGEDIQVIEEMHHVN
AKKDFQELYIVRENRTLQAKEADYQINGEIICRDCGQAWGTMMVHRGLDLPCLKIKNFVV
VFKEKKTAPTQIFKRWSELPIKFPDFDYAEHCESSDED
NT seq 2997 nt   +upstreamnt  +downstreamnt
atggccacggccccttcccgcgacgagaccatcctctacctagtctcctgcttcaggccg
aagatcaggcgaggcctgcaggtggtgcaggtgctggactacatgccctgcctgagccgc
gaagtgaaggagcacgtccgaacggtgtgcgacaaccagggcaacatagcagcggccgac
gagctcttgagagccttggaggacgcgcctcgccgcccgccgggcttgtgcctggagttc
tacgacgcgctgcgacgagggggctttcgggccgccgcctacctgaaccccagcctggac
gagctgcccacgccgtccctggaagaagtccacgagacgggcacccagctgctggagatc
ttcatggggagtttggtggagaacctgagggccgtgcaggtggccgagaagtgtgtcgcg
cagcggctcttcaatggcgaggactttgagagggtgagaactctgcatgatgcgcgtgga
aatcaagaagctgtgagggaactgctgagcagaatagagcgaaagagaaagtggttctct
ccatttctggctgccttgcgtgatgctcaccatgaaaagattgcagatgaactaaatgga
gaggaaaccgaatataatgagaatgggttatctgcagacaaaactgaagagctacgtgga
tctgcagccgtgggggaggtgaagaaaggaactgacatggagcccagttcatccggtgag
gagaatgcttcagaagaattctgggaggcctctgctgtttcagaatctgatgtcagcttg
ctagatgcaagtgtcgatgacaccaacgaaagccttggacaggtcagcttcggcggtgat
tcagatgatgtggatgatggagacaagagatcttcacctgaaccagagctgagtctcaga
gactaccagatggaagtagctaaaccagccctggaagggaagaatattatcatatgcctc
cctacaggcagtggcaagacccgcgtggctgtttatattgccaaacaccatttggatgag
aagagagaagaaaagaagactgggaaagttatagtacttgtcaacaaggtgcctttggtg
gagcagcatttccggaaagaatttcacctctacctgaagcaccagtatcgagtagctaag
ctgagtggtgaatctcagctgaaaattttattccccagagtcgtccaaaataatgatgtc
attatctgcactgctcagatccttgagaatgcgctgctgaatgcagacagagatcctgaa
gaaggagtccgtttagcagagttctctctgattattattgatgaatgccatcacactcac
aaggaaggtgtctataacaatattatgcgtcgttatctgaaagaaaagaggcaaaataag
aagcaaagcaactcatggcttcctcagccacagatcctgggactgacagcctcacccggt
gtaggaggtgcaaaaaacccttccaaagctgaggaacatattctgaaaatatgtgccaat
cttgatgcagagaggatcatgactgttaaagaacatgcacagcaactgagcaatcaagtg
aaggaaccttataaaaagtttgagattgcagatgacaaacggcaggatccattcaaagaa
aaactcataagcataatgaccgagatccagtcgtattgcaagttcaatccaagatgtgag
tttggatctcagacctatgaacagtgggttgttcaagaggagaagaaagctgctaaagaa
aagaatcgtaaagaacgtgtctgtgcagagcatttgaagaaatacaacgatgctttgcaa
atcaacgacaccatccgaatgattgattcgtacgaacatctcaaaagcttctatcaggaa
gagaagaacaagaagatggcagtgaatgaagaagaggatgagcccctgccattgaaacta
gaagaaacagataagttcctcatcggtttattttatggcaaagaaaagttgatgaaagag
ctggcttctaaggaacaatatgagaatgaaaagctggtaaagctgcgcagcactttgatg
gtagagttctcaaagacatttgagcccagagggatcattttcacaaagactcggcagagt
gcctatgccctttatcagtggattaaagagaacccaaaatttgaagaccttggagtgaaa
gctcattacctgattggtgccggacacaatagtgaatttaagccaatgacacagaacgaa
cagaaggaagtcatagagaaattccgccgtggagaagtgaacctactcattgctactact
gtggcagaagaaggcctggatatcaaggaatgtaacatcgttatacgctatggtcttgtt
accaatgaaatagctatggtgcaggcacgtggaagagctcgagctgaagaaagtacctat
gtacttgtggcttcagatggatccggagctgttgagcgtgaaaacgtgaatatttttcgt
gagaaaatgatgtataaagcaattagacgtgtccaagaaatgaccccaaatgaatatttt
cgcaagatcgaaggctttcagctgcaaagtaaaagggaagtcagaatgaaggcaaagaaa
caggagcgtaaggtttacaagcaaaatccatcctttataaaattcctatgcaaaaactgc
cagaaggaaatatgttcgggagaagatatacaagttattgaagagatgcatcacgtcaat
gccaaaaaggacttccaggagctttatattgtaagagaaaacaggactctgcaggcaaag
gaagccgattatcaaataaatggagaaattatctgcagagattgtggacaagcttgggga
actatgatggtacatcgaggtctagacctgccatgcttaaaaataaaaaattttgtggtt
gttttcaaagagaagaaaactgctccaacccagatcttcaaaagatggagcgagctgccc
attaagtttccagattttgattatgcagaacattgtgagtccagtgatgaagattaa

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