KEGG   Geobacillus sp. JF8: M493_14155Help
Entry
M493_14155        CDS       T02798                                 

Definition
5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gjf  Geobacillus sp. JF8
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gjf00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    M493_14155
Enzymes [BR:gjf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     M493_14155
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M493_14155
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2639032..2639856)
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETIRRTLLPLVVGKTIADVRVFWSNIIRHPQDPETFAARLAGQTVRGIERRGK
FLKFLLDRDMLVSHLRMEGRYTVANAHEPLDPHTHVVFCFTDGNELRYRDVRKFGTMHVY
PKEEGDRQPPLDQLGPEPLSPAFSPAILAERAAKTKRAVKALLLDQTVVAGFGNIYVDES
LFRAGILPDRPAASLTREEIKRLHEQMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHSLF
VYGRKGEPCKRCGAPIEKTVVAGRGTHYCPRCQR
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccggaggtggaaacaatccgccgcacgctcttgccgcttgtcgtcggg
aaaacgattgcggatgttcgtgttttttggtcgaacatcatccgtcacccgcaagacccg
gagacgtttgccgccaggctcgccgggcagacggtgcgcggcatcgagcggcgcgggaaa
tttttgaagtttttgcttgaccgggatatgctcgtctcccatttgcgcatggaagggcgc
tatactgtcgccaatgcacacgaaccgctcgatccgcatacgcatgtcgtgttttgtttt
actgacggcaacgaactccgctaccgcgatgtgcgcaagtttgggacgatgcatgtgtat
ccgaaggaggagggagaccgccaaccgccgcttgatcaattagggccggagccgctttct
ccggcgttttccccggccatattggccgagcgggccgcgaaaacgaagcgggccgtaaaa
gcgttgctgcttgaccaaacagtcgtcgccgggtttggcaacatttacgttgacgaatcg
ctgtttcgcgccggcattcttcccgaccggccggctgcttcactgacaagagaagaaatc
aaacggctgcatgaacaaatggtcgcgaccatcggggaggcggtcatgaaagggggaagc
acggtgcgcacatatgtgaacacacaaggggaagcgggcacgtttcaacatagtttgttc
gtatacggccgcaaaggggagccgtgtaaacgatgcggcgccccgattgaaaaaacggtt
gtcgccggccgtggcacgcactattgtccgcgctgccagcggtag

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