KEGG T00708: Glov

Geobacter lovleyi: Glov_0244

Entry

Glov_0244 CDS T00708

Definition

helicase, RecD/TraA family (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

glo Geobacter lovleyi

Pathway

glo03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:glo03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 Helicase_RecD HHH_5 PIF1 AAA_28 PhoH UvrD-helicase T2SE HHH NTPase_1 AAA_16 HHH_2 DUF2075 AAA_22 AAA_29 FtsK_SpoIIIE cobW AAA DUF258 AAA_5 ABC_tran NACHT AAA_14 MobB UvrD_C Mg_chelatase AAA_10 Herpes_Helicase AAA_17 AAA_18 MMR_HSR1 AAA_25 TrwB_AAD_bind

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

222020..224206

AA seq 728 aa
MNGKGTTSDVPVERISGSVERVTFHSEESGFCVLRIKVKGKRELVTVIGSAATITPGEFV
ECVGTWHNDKTHGLQFKTTHLKTVPPSTLEGIEKYLGSGMVKGIGPHFAKVLVKAFGVDV
FTVIEETPEKMLSLPGIGKKRTDKVTAAWAEQKAIREIMVFLQSHGVGTGRAVRIYKTYG
DEAIIKVSENPYRLALDIHGIGFKTADVIADRLGIAPDSLIRAQAGVRHVLQELSGDGHC
AATHDTLIKESVKLLEIDEAILEEAIREEVTQENLVPEEIDDVPCLFLSALHRAELGVAN
SVRRILSGEPPWGKIDMEKALPWVEEKTGLSLSQSQQDAVCLALTSKALVITGGPGTGKT
TLVNSILKILAAKQLEILLAAPTGRAAKRMTETTGREAKTIHRLLEFDPQSFGFKRGRDN
PLEADLIVIDESSMVDVVLMNKLLAAVPESTALMIVGDVNQLPSVGPGAVLADIITSGSV
PTVRLTEIFRQAATSKIIVNAHRINKGELPLRNETEELSDFYFIPAETPEEIHAKLLQVV
TERIPKRFGLHPVKDVQVLTPMNRGGLGAHALNAELQKVLNGNSEPKITRFGTTYSPGDK
IIQTVNNYDKEVFNGDIGQILEIDTEESSLKADYDGRIVEYEFGELDEVSLAYATSIHKS
QGSEYPAVVIPLAMQHYMLLERNLIYTAVTRGKKLVTIIGQPKALGMAVKNKNATKRLTN
LTARLRSA

NT seq 2187 nt +upstreamnt +downstreamnt
atgaacgggaaaggcaccacttcagatgtcccggtcgaacggatttccggttccgtcgag
agggtaaccttccacagcgaggaatcaggtttctgtgtgctccggatcaaggtaaaaggt
aagcgcgagttggtcacggtcatcggcagtgcggcaacgataaccccaggtgaattcgtc
gagtgtgttggtacctggcataacgacaagacccacggcctgcagttcaagactactcac
ctgaaaacagtccccccgagtaccctggaaggcatcgaaaagtaccttggctccggcatg
gtcaaagggatcggcccccatttcgccaaagtactggtgaaggcattcggcgtcgacgtc
ttcaccgttatcgaggaaaccccggagaaaatgctgtcactccccggcattggcaagaaa
aggacggataaagttaccgctgcctgggcagagcagaaagcgatccgggagatcatggtt
ttcctccagtcccatggtgtcgggaccggtcgggcggtcaggatctacaaaacttatggc
gatgaggccatcatcaaggtgtctgagaacccctaccgcttggctctcgacattcacgga
atcggtttcaagaccgctgacgtcattgccgacaggctgggtattgccccggactcactg
atccgggctcaggccggcgtgcgccatgtattgcaggagttgtccggcgacggccattgt
gccgccacccacgacaccctcatcaaggagtcggtaaagcttctggagattgacgaggca
atcctggaagaagcgatccgggaggaagtcacccaggaaaacctggtgccggaagaaatc
gacgacgttccctgtctgtttctgtccgcgcttcaccgggctgaactgggagtggcgaac
agcgtcaggagaatactgagtggagagccgccatggggcaaaatcgatatggaaaaggcg
ctcccctgggtggaagagaagacgggcctttcactctcccagtcgcagcaggacgctgta
tgccttgctttaaccagcaaagcactcgtcatcaccggcggcccgggcaccggcaagacg
accctggtcaatagcatcctgaagatcctcgcagccaaacagctcgaaatcctgttggcc
gccccgaccggacgcgcggccaagcggatgaccgagactacaggacgggaggccaagacc
attcatcgcctcctggagtttgatccccagagtttcggtttcaaacgcgggcgagacaac
cctctcgaagcagacctcatagtcattgacgaatcatctatggtggatgtggtgctgatg
aacaagctcctcgcggcagtccccgaaagcaccgctctgatgattgttggcgatgtaaat
cagctgccttcagtcggtcccggtgcggtgctggccgacatcatcacatccggttctgtc
ccgaccgtcaggctgaccgagattttccgccaggcagccacctcaaagatcatcgtcaat
gcccaccggatcaacaagggagagttgccgctgagaaatgaaacggaagagctatccgac
ttctacttcataccggcagaaactccggaagaaattcacgccaagctactgcaggtggtt
accgaacgcattccgaagcgcttcggcctgcatccggtcaaggatgtccaggttctcacc
ccgatgaaccggggaggactgggcgctcacgccttgaacgcggaactccagaaagtgctc
aatgggaacagcgagcccaaaataacccgctttggaacgacgtactcgccgggtgacaag
atcatccagacggtgaataactacgacaaggaagtcttcaacggggatattggccagatt
cttgaaatcgataccgaggaaagctccctcaaagctgattacgacggtagaatagtcgag
tatgaatttggtgaactggacgaggtgtcgctggcctatgccaccagcatccataagagc
cagggttcagagtacccagctgtcgtgattccactggcaatgcagcattacatgctgctg
gagaggaatctgatctatacggccgtcacgcgggggaaaaaactggtgacgatcatcggc
cagcccaaggcattgggtatggcggtgaagaataaaaatgccacaaagcgtttgacgaat
ttgacagcgaggctgcgttccgcatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GLO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (38)   
   Pfam (38)   
All databases (48)   

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