KEGG   Glarea lozoyensis: GLAREA_01538
Entry
GLAREA_01538      CDS       T04883                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
glz  Glarea lozoyensis
Pathway
glz03022  Basal transcription factors
glz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GLAREA_01538
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLAREA_01538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:glz03021]
    GLAREA_01538
   03400 DNA repair and recombination proteins [BR:glz03400]
    GLAREA_01538
Transcription machinery [BR:glz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     GLAREA_01538
DNA repair and recombination proteins [BR:glz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     GLAREA_01538
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 19460596
NCBI-ProteinID: XP_008086945
UniProt: S3D0R5
Position
Unknown
AA seq 355 aa
MDRVDGTDHYEGDVQGPGPSLLVIVLDTNPHAWTLLHPTLPLSKAIANILVFINAHLASH
NANQVAVVASHCHRAVWLYPRPQAANSVDVEMKDASHPSLNDANKYRPFALIEDSLLTSL
RELVATTTEPDISTTNTSQMAGALTLALAYINKVNVAYLDENTSPSKESTTSVDTTTNVT
GLQSRILVISVSGDLAHQYIPIMNTTFAAQRLRIPIDILKLAGDTVFLQQASDTTKGIYM
QLSNPQGLLQYLMMAFLPDNTSRKSLVAPTQEVVDFRAACFCHRRVVDVGFVCSICLSIF
CTPPEGAVCMTCSTHLTLGDYGAKPAVVPRRKKKKRKLNGGVDTPSPQGTPVPGK
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggaccgcgtagatggaacggatcattacgaaggcgatgtacaaggccctggtccatcc
ctcctcgtcattgtactcgataccaatcctcacgcatggacactattacatccgactctc
cccctctcgaaagcgatcgccaacattcttgtatttataaacgcacatcttgcctctcat
aatgccaatcaggtagctgtagtcgcgagccattgccatcgtgcggtatggctctatcct
cgcccccaagctgccaactcggtagacgtcgagatgaaagacgcctctcacccaagtctt
aatgacgccaacaaataccgcccatttgctcttatagaagatagtcttctcacttccctc
cgcgagttggtagcgaccacaacagagccagacatatctactacgaatacctctcagatg
gctggtgctcttaccttagctttggcatatataaacaaagtcaacgtagcttacttggat
gaaaacaccagcccctccaaggaatccactacctcggtcgacaccacaacgaacgtgacc
gggttacagagtcgtattttggtgatttcggtgtctggggatttggcgcatcaatatatc
ccaataatgaacacaacattcgcagcccagcggttgcggataccaatagatatattgaaa
ctagctggagatacagtattcttacaacaggcatctgatactaccaaagggatttacatg
cagttaagtaacccacaggggctgctacagtatctcatgatggcatttctgccggacaac
acatctcggaaaagtctagtagcgcccacgcaagaggtggtagattttagagcagcatgt
ttctgccatagaagggtggtggatgtcggctttgtgtgcagtatatgcctgagcattttc
tgcacgcctccagaaggtgctgtgtgtatgacatgctcgacacacctgacactcggtgac
tatggtgcgaaaccagcagttgttcctcggaggaagaagaagaagcggaagcttaatgga
ggagttgataccccaagcccccaaggaactcctgttcctggaaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system