KEGG   Glarea lozoyensis: GLAREA_03034
Entry
GLAREA_03034      CDS       T04883                                 
Name
(RefSeq) Nucleic acid-binding protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
glz  Glarea lozoyensis
Pathway
glz03020  RNA polymerase
glz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GLAREA_03034
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLAREA_03034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:glz03021]
    GLAREA_03034
   03019 Messenger RNA biogenesis [BR:glz03019]
    GLAREA_03034
   03400 DNA repair and recombination proteins [BR:glz03400]
    GLAREA_03034
Transcription machinery [BR:glz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     GLAREA_03034
Messenger RNA biogenesis [BR:glz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     GLAREA_03034
DNA repair and recombination proteins [BR:glz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GLAREA_03034
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 19462090
NCBI-ProteinID: XP_008086310
UniProt: S3CN19
Position
Unknown
AA seq 192 aa
MFFVLNLTHQVTLHPSYFGRNMHELVTHKLLKDVEGTCTGRYYIITIMDTVNISEGRILP
GSGLAEFNVNYRAVVWRPFKGETVDAIVTSVNGVGFFCEAGPLSIFVSGHMIPSDITFDP
NATPPQWTDNEDSVIQVGTHVRVKIFGTREEVGSIYAIASIKEDYLGANGCILMMLQKEL
ARMIPKAQACDF
NT seq 579 nt   +upstreamnt  +downstreamnt
atgtttttcgttcttaacctcacccaccaggtcactttgcatccgtcatatttcggtcgg
aatatgcatgagctggtcacgcacaagttactgaaggatgtcgagggtacttgcaccggg
agatattatatcattaccataatggacacggtcaatatctcagaaggtcgtattctaccc
ggaagtgggttggctgaattcaacgttaactaccgcgcggtggtatggaggccgttcaag
ggcgagaccgttgatgctatcgtgacttctgttaacggcgttggctttttctgtgaagct
gggccgctatcaattttcgtgtctggtcatatgattccttcggacattacatttgaccca
aatgctacccctccacagtggactgataatgaagattctgtcattcaggtcggtacacat
gtgcgcgtcaaaatctttggtacaagggaagaggtggggagtatctacgctattgccagt
atcaaggaggattaccttggcgccaatggctgtattctaatgatgctacaaaaagaactg
gcccgtatgataccaaaagcacaggcttgcgacttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system