KEGG   Geobacillus sp. Y4.1MC1: GY4MC1_0839Help
Entry
GY4MC1_0839       CDS       T01348                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gmc  Geobacillus sp. Y4.1MC1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gmc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GY4MC1_0839
Enzymes [BR:gmc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GY4MC1_0839
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GY4MC1_0839
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
844311..845135
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETIRRTLIPLAAGKTVADVQVFWPRIIKHPANISEFIETIKGQTIRDIHRRGK
FLKFIFDEHVLISHLRMEGRYAVSKKKDAIEPHTHVIFQFTDGTELRYRDVRKFGTMHLY
PKGEEDSRLPLSQLGPEPFSEEFTANFLAKRLRKTNRTIKAALLDQTVVVGFGNIYVDEA
LFRAGIHPERAASSLTDEEAACLHREMVATLQEAVEKGGSTVRSYVNTQGEIGMFQLQLF
VYGRKGEPCKRCGNPIQKTVVAGRGTHYCAFCQH
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgccagaactgccggaagttgaaacgattcgccgcactctcattccgttagccgctggc
aaaaccgttgccgatgttcaagtgttctggccgagaatcataaaacatccggcaaatatt
agtgaatttatagaaacgataaaaggacaaacgattcgtgacattcatcggcggggaaaa
tttttaaaatttatttttgatgaacatgtgcttatttcccatttgcgcatggaagggcgt
tatgcggtttcgaaaaagaaagatgccatcgagccgcatacgcacgtgatttttcagttt
acagacggcaccgaacttcgctatcgtgacgtaagaaaattcgggacgatgcatctttat
ccgaaaggagaagaagattcccggcttcctttgtcacagttaggcccagaaccgttttcg
gaagagtttaccgcaaattttcttgcaaagcggctgcgaaaaacgaaccgaacgatcaaa
gcggcgctgcttgaccaaaccgtggtcgtcgggttcggcaacatttatgtcgatgaagcg
ctgttccgcgccggaatccatccggaacgcgctgcgtcatcattaacggatgaggaggcg
gcatgtttgcatcgggaaatggtggcaacattgcaagaagcggtcgaaaaaggaggaagc
acggtaaggtcatacgtcaacacgcaaggggaaatcggaatgtttcaattgcagttattc
gtgtacgggcgcaaaggagaaccgtgcaaacgctgcggcaacccgattcaaaaaacggtg
gttgccggccggggcactcattattgcgccttttgccagcattaa

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