KEGG   Geobacter metallireducens: Gmet_0730Help
Entry
Gmet_0730         CDS       T00295                                 

Gene name
sucD-1
Definition
(GenBank) succinyl-CoA synthetase, alpha subunit
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
gme  Geobacter metallireducens
Pathway
gme00020  Citrate cycle (TCA cycle)
gme00640  Propanoate metabolism
gme00660  C5-Branched dibasic acid metabolism
gme01100  Metabolic pathways
gme01110  Biosynthesis of secondary metabolites
gme01120  Microbial metabolism in diverse environments
gme01130  Biosynthesis of antibiotics
gme01200  Carbon metabolism
Module
gme_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gme_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:gme00001]
 Metabolism
  Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Gmet_0730 (sucD-1)
   00640 Propanoate metabolism
    Gmet_0730 (sucD-1)
   00660 C5-Branched dibasic acid metabolism
    Gmet_0730 (sucD-1)
Enzymes [BR:gme01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     Gmet_0730 (sucD-1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2
Motif
Other DBs
NCBI-ProteinID: ABB30972
JGI: Gmet0730
UniProt: Q39XQ2
Position
802382..803257
Genome map
AA seq 291 aa AA seqDB search
MSILINKDSKIVVQGITGRSGLFHTQQCRDYGSRIVAGVTPGKGGIHIEGIPVFNTVEEA
VRYTGANVSMIFVPPPGAADAILEAADAGVDLAVCITEGIPVRDMVPVKRILQGSKTRLV
GPNCPGVITPGECKVGIMPGYIHKPGKIGVVSRSGTLTYEAVKQITEAGLGQSTCVGIGG
DPIIGMQFIDVLKLFNEDKQTEAVFMIGEIGGSAEEDAAEWIRENMKKPVAAFIAGVTAP
PGKRMGHAGAIITGGKGKAEDKIRTLGECGVVVAPSPTKMGAAMLEALGKK
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgtccatactcatcaacaaggattcaaagatagtcgtccagggaatcacgggccgcagc
ggcctcttccacacccagcagtgccgggactatggctccaggatcgtggccggcgtcacc
ccgggcaagggggggatccacatcgaggggattccggtcttcaatacggtggaggaggcg
gtgcggtacaccggcgccaatgtctccatgattttcgttccaccccctggggccgccgac
gccatccttgaggcggccgacgcgggggtcgacctggcggtctgcatcaccgaagggatc
ccggtgcgcgacatggtgccggtgaagcggattctccaggggagcaagacccgcctcgtg
gggcccaactgccccggcgtcatcaccccgggcgagtgcaaggtggggatcatgcccggc
tacatccacaagcccggcaagatcggcgtcgtctcccgcagcggcaccctcacctacgag
gcggtgaagcagatcaccgaggcggggctcggccagtccacctgtgtcggcatcggcggc
gaccccatcatcggcatgcagttcatcgatgtcctgaagcttttcaacgaggacaagcaa
accgaggcggtcttcatgatcggcgagatcggcgggagcgccgaagaggacgccgccgag
tggatccgggagaacatgaagaagcccgtggccgccttcatcgccggggtcaccgccccc
ccgggaaagcggatgggccatgccggcgccatcatcaccggcgggaagggaaaggcggag
gacaagattcgcaccctgggcgagtgcggcgtggtcgtggccccgagccccacgaaaatg
ggggcggccatgctggaggcccttggcaagaagtaa

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