KEGG   Geobacter metallireducens: Gmet_3559
Entry
Gmet_3559         CDS       T00295                                 
Symbol
gidA
Name
(GenBank) tRNA (5-carboxymethylaminomethyl-U34)-formylglycinetransferase/reductase
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
gme  Geobacter metallireducens
Brite
KEGG Orthology (KO) [BR:gme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gme03016]
    Gmet_3559 (gidA)
   03036 Chromosome and associated proteins [BR:gme03036]
    Gmet_3559 (gidA)
Transfer RNA biogenesis [BR:gme03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Gmet_3559 (gidA)
 Prokaryotic type
    Gmet_3559 (gidA)
Chromosome and associated proteins [BR:gme03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Gmet_3559 (gidA)
SSDB
Motif
Pfam: GIDA GIDA_C_1st GIDA_C FAD_oxidored Pyr_redox_2 DAO FAD_binding_2 AlaDh_PNT_C ThiF Pyr_redox Pyr_redox_3 HI0933_like NAD_binding_8
Other DBs
NCBI-ProteinID: ABB33764
UniProt: Q39PR0
Position
complement(3991612..3993486)
AA seq 624 aa
MEFIDYDKQYDVIVVGAGHAGCEAALAAARMGCETLLLTINLDAIALMSCNPAIGGSAKG
HLVKEIDALGGEMGKNIDATGIQFRILNTRKGPAVRASRAQADKQLYRLRMKHVMEQQER
LSLKQAEVTGIVVEDGEVRGVDTKVGVRYLGATVILTTGTFMRGLIHVGLTNYPGGRAGD
LPSVGLSDQLRELGFAVGRLKTGTPARLDGRTIDFTRLEPQHGDDPPVPFSFSTERIDQP
QVPCYIAYTNPRSHEIIRSGLDRSPLYAGVIEGIGPRYCPSIEDKVVRFPEKDRHQTFLE
PEGRDTVEYYPSGLSTSLPIDIQWAFYRSIEGLERVEIMRPAYAIEYDYVDPIQLHASLE
TKLVRNLYHAGQINGTSGYEEAAGQGLMAGINAALRVRDKEPLILGRSEAYIGVMIDDLV
TLGTREPYRMFTSRAEYRLLLREDNADLRLRERGHAVGLVPEGAYQRFLEKRERIGAELA
RLKGTKLLPSEADPDFLAAFSLTALQNALTYEQLLRRPDITYEELCRIDPRAAEVPPVVR
EQVEIQIKYQGYIERQLDQVERARKLEGTRVPAGFDYGALPGLSAEVREKLAKFRPDTLG
QASRIQGVTPAAVGILSLALKARG
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggaattcatcgactacgataaacagtacgacgtcatcgtggtgggggcgggccatgcc
ggctgcgaggcggccctggccgctgcccgcatggggtgcgagacgctgcttctcaccatt
aatctggacgccattgccctcatgtcgtgcaaccctgccatcggcgggtcggccaagggg
catctggtgaaggagatcgatgccctcggcggcgagatgggaaagaatatcgacgccacc
ggcatccagttccgcatcctcaatacccgcaaggggccggcggtccgggcctcccgggcc
caggccgacaagcagctctaccgtctccggatgaaacacgtcatggagcagcaggaacgc
ctctccctcaagcaggccgaggtgaccggcattgtggttgaggatggcgaggtacgcggt
gtcgatacgaaggtcggggtccgctacctcggcgccaccgtcatcctcaccaccggcacc
ttcatgcgggggctcatccatgtggggctcaccaactaccccggggggagggcgggggat
ctaccgtccgtggggctgtcggaccagctccgggagctgggctttgccgtgggccgtctc
aagacgggcaccccggcccggctcgacggccgcaccattgatttcacccgcctggagccc
cagcacggggatgacccgccagtaccgttctctttctccacggagcggatcgaccagccc
caggtgccgtgctacatcgcctacaccaacccccgctcccacgagatcatccgctcgggg
ctcgaccgctcgcccctctatgccggcgtgatcgaaggaatcggtccccgctattgcccc
tccatcgaggacaaggtggtccgcttccccgagaaggaccgtcaccagacctttctggag
cccgaggggcgggacacggtggagtactatccctcggggctctccacctcgctccccatc
gatatccagtgggccttctaccggagcatcgaggggctggagcgggtggagatcatgcgg
cccgcctatgccatcgagtacgattacgtggacccgatccagctccacgcctccctggag
accaagcttgtccgtaacctctaccacgccggccagattaacggcacctccggctacgaa
gaggcggcggggcaggggctcatggcggggatcaacgccgccctgcgggtgcgggacaaa
gaaccgctgattctgggccggagcgaggcttatatcggcgtcatgatcgacgaccttgtt
accctcggcacccgggaaccctaccggatgttcacctcacgggccgagtaccggctcctc
ctgcgggaggacaacgcggacctgcggctccgggagcggggccacgccgtggggctcgtg
ccggaaggagcgtaccaacggttcctggagaaacgggagcggatcggtgccgagcttgct
cggctcaagggaacgaaactcctcccctccgaagcggatccggatttcctggccgcgttc
tccctgacagctctccagaatgccctcacctatgagcagctcctgcggcgtcccgatata
acctacgaggaattatgccgcatcgatccccgggcggcggaggtgccgccggtggttcgg
gagcaggtggagatccagatcaagtaccaggggtacatcgagcggcagctggaccaggtg
gagcgggcccggaagctggaagggacccgtgttcccgccggcttcgactacggggccctc
cccggcctctcggccgaggtgcgggagaagctggccaaattccgtcccgacaccctgggg
caggcctcccgcatccagggggtaaccccggcggcggtggggattctgtcccttgccctc
aaggcccgggggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (13)   
   Pfam (13)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system