KEGG   Glycine max (soybean): 100305778
Entry
100305778         CDS       T01710                                 
Name
(RefSeq) Sm_like superfamily protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
gmx  Glycine max (soybean)
Pathway
gmx03018  RNA degradation
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100305778
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100305778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100305778
   03041 Spliceosome [BR:gmx03041]
    100305778
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100305778
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100305778
Spliceosome [BR:gmx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100305778
 Complex C
  U2 snRNP components
    100305778
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 100305778
NCBI-ProteinID: NP_001236540
UniProt: C6SWL3
Position
19:41820825..41822612
AA seq 93 aa
MLFFSYFKDLVGREVIVELKNDLAIKGTLHSVDQYLNIKLENTSVVNQEKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcgtacttcaaggatttggtggggagggaagtaatcgtggagctgaag
aacgatttggccatcaaaggaacattgcattctgttgatcagtacctcaacatcaagctc
gaaaacactagcgtcgtcaatcaagaaaagtaccctcacatgctttctgtaagaaactgc
ttcatcagaggttcggtagtgagatatgtgcaattgcctccagaaggggtggacattgaa
ttattgcacgatgccacaagaagagaagcccggggcggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system