KEGG   Glycine max (soybean): 100781856
Entry
100781856         CDS       T01710                                 
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100781856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmx03400]
    100781856
DNA repair and recombination proteins [BR:gmx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     100781856
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII SAWADEE
Other DBs
NCBI-GeneID: 100781856
NCBI-ProteinID: XP_040867881
Position
18:1738781..1747710
AA seq 1269 aa
MEASVLLGNSYGVVARVAVAGLRGGVMGARNTMMHRKSHLRQRKHPFHACPFEAYLSRSW
RAVELIKFESGTTTLYFVDNHHMTIKKGSFSDVRVRSRKATLSDCSFLRTGIDICVLSAS
QGNDNSDESSANHVWLDAKINSIQRKPHNPECSCQYYVNFYVNQGSLGTELRTLRKEVKV
VGINEIAILQKLERNTCQHKYYRWESSEDCSKVPHTKLLGKFISDLSWLVVASAIRKVSF
CARSVENNIVYQILGSDATTSSLYMDSEISVVNFKVNEDGMQMPVIHLVDLFETDTNTSG
DKHDSHYDEVPSSYGFEGLRRSKRRNIQPERYSDCGNVSEIKVGNVRTWPYKLNKRKDDD
GGGEESLPLAQENSDNSQKVNELSSCREIIVYHGRNETLELKSGEANQTQLASVPLLQEG
DSLALEHHHLNDNVTRRSDAYYSTPKLKRKRLVDLEADVDFDPGREGINSNKGVSEKRHG
SSWYSRSRSHAAEHSYKDRSLNATAYKEMIDSYLKDVNRTPTTEEPPVMDQRKEIGNFGQ
KKEAEIPEREDEEQISEIDMLWREMEMALASSYLEETEGSNSANFAKTTEESNRTCPHDY
RLSEEIGIYCYKCGFVKTEIKYITPPFVSQVQNHVWHQEEKQCNGKDTKEKASKDDDFHL
LSTHAPTDEHNSMEHDNVWKLIPQFREKLHDHQKKAFEFLWQNIGGSMEPKLMDAESKRR
GGCVISHAPGAGKTFLIIAFLVSYLKLFPGKKPLILAPKGTLYTWCKEFNKWEISMPVYL
IHGRGGTQKDTEQNSIVLPGFPNPNKYVKHVLDCLQKIKLWQEKPSVLVMSYTAFLALMR
EGSEFAHRKYMAKALREGPGILILDEGHNPRSTKSRLRKGLMKLKTDLRILLSGTLFQNN
FCEYFNTLCLARPKFISEVLDTLDPITRRKSKTVEKAGHLLESRARKLFLDKIAKKIDSG
IGNERMQGLNMLRETTNGFVDVYESENFDSAPGLQIYTLLMNTTDKQREILPKLHTRVDE
CNGYPLELELLVTLGSIHPWLVKTTSCANKFFTADQLKQLDKYKYDMKAGSKVKFVLSLV
FRVMQREKVLIFCHNLAPVKLLIELFEMFFKWKKDREILLLSGELDLFERGKVIDKFEEH
GGASKVLLASITACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQEKMVYVYQLL
VTGTLEEDKYKRTTWKEWVSSMIFSEAFEENLSHSRAVNIEDDILREMVEEDKSKTIHMI
LKNEKASTN
NT seq 3810 nt   +upstreamnt  +downstreamnt
atggaggcaagtgttcttcttggaaacagttatggggtggtagctcgcgtggctgtggcg
ggtcttcgtggtggagtgatgggtgcacgcaatacaatgatgcatagaaaaagtcattta
cgtcaacggaagcatccattccatgcttgtcccttcgaggcatatttgtctcggtcatgg
cgagctgtggagctcataaaatttgagtctggaactacgaccctatattttgtagataat
caccatatgaccattaagaaaggctccttttcagacgttcgagttaggtcaaggaaagct
actttatcagattgctcctttttacgaactgggattgacatatgtgttctctcagcctct
cagggtaatgacaattcagatgaatctagtgctaatcatgtgtggcttgatgctaaaata
aattccatacagagaaaaccacataatccagagtgctcatgtcagtattatgtaaacttc
tatgttaatcaaggttcacttggtacagagctgagaactcttaggaaggaggttaaagta
gttggaataaatgaaattgccatcctccaaaagcttgaacgtaatacttgtcaacacaaa
tactatcgatgggaatcatctgaagactgctccaaagtgccacatactaaattgttagga
aaatttatatctgacctttcatggttggttgttgcatctgctataaggaaggtttcattc
tgtgcaagatctgtggaaaacaatattgtgtatcaaattttagggagtgatgctacaacc
tcttcattatacatggattctgaaataagtgttgtgaactttaaagtgaacgaagacggc
atgcaaatgcctgttattcatctagttgatttatttgagactgacaccaatacaagcggc
gataaacatgattcccactatgatgaagtgccatcatcttatggttttgagggcttacga
cgatccaaacgtaggaacatacaacctgaacgttactctgattgtggtaatgtttctgag
ataaaggttggtaatgttcgaacctggccatacaagttaaacaaaaggaaagatgatgat
ggtggtggtgaagagtcattgccattagcacaagagaatagtgacaatagtcaaaaggtc
aatgaactgagttcttgccgggagattatagtgtaccatgggaggaatgaaacgctggaa
ttaaagtcaggtgaggccaatcaaactcaacttgctagtgttcctcttcttcaagaaggt
gattcattagcccttgagcatcatcatctcaatgacaatgttactagaagaagtgatgca
tattatagcacccctaagcttaagaggaagagattagttgatctggaagctgatgtagat
tttgatcctggaagggaaggcataaattccaataaaggagttagcgagaaaagacatggt
tcatcatggtattcaagaagcagaagccatgctgcagaacacagttataaagacagaagc
ttaaatgcaactgcctacaaggaaatgatagattcatacttgaaggatgtcaatagaaca
ccaactacagaagagccacctgtaatggaccagcggaaggaaataggcaactttgggcaa
aagaaggaagcagaaatacctgaaagagaggacgaggaacaaatctctgagatcgatatg
ttgtggagagaaatggaaatggcactggcatcaagttatcttgaagaaacagagggttca
aatagtgccaattttgccaagactacggaagaatctaatcgcacttgtccgcatgattac
agattgtctgaagaaattggaatttattgctacaaatgtggctttgtgaaaaccgagata
aaatatattacgccacccttcgtaagtcaagttcaaaaccatgtttggcaccaagaggaa
aagcaatgcaatggaaaagatacaaaggaaaaggctagtaaagatgatgatttccatctg
ctctcaactcatgctcctacagatgaacataactctatggaacatgataacgtttggaag
ttaattccccaatttagagaaaagttgcatgaccaccaaaagaaggcttttgaatttctt
tggcaaaatattggagggtctatggagccaaaacttatggatgcagaatccaaaagaaga
gggggttgtgtgatatctcatgctcctggagctggtaaaacttttctcatcattgcattt
ctcgttagctatttaaagctattcccagggaagaagcctcttatccttgctccaaaaggc
acactttacacttggtgcaaagaattcaacaagtgggaaatttctatgccagtgtatctg
attcatgggcgtggtggaactcagaaagatactgagcaaaattcaattgttcttcctggt
tttccaaatccaaataaatatgtcaagcatgttttggactgcttgcaaaagataaaactg
tggcaagagaaaccaagtgttttggtcatgagctatactgcatttttagcattaatgaga
gagggttcagagtttgcacacagaaaatatatggctaaagcattgagggaaggtcctggg
atcttgatacttgatgaagggcacaatccaagaagcaccaagtcaaggttgaggaaaggg
ttgatgaaactgaaaacagatctaagaatactactttccggtacattatttcagaacaat
ttttgtgaatacttcaacacactttgcttggcaagaccaaagtttatctccgaagtgctt
gatacattagacccgattaccagaaggaaaagcaaaacagtagaaaaggcaggtcatttg
ctagaatcacgagctagaaaattgttcttagataaaattgctaagaaaattgactcgggt
attggaaatgagaggatgcagggtctaaacatgttgagagaaaccacaaatggttttgta
gatgtttatgagagtgaaaattttgatagtgctcctggtttacaaatctacacgttgcta
atgaatacaactgacaagcagcgtgagattttgccaaaactacacacgagagtggacgag
tgcaatggttaccctctagagctagagcttttggtaactcttggatcaatacatccatgg
ttggttaaaacaacctcatgcgcaaataagtttttcactgcagaccaattgaagcagcta
gacaaatacaagtatgatatgaaagcaggatcaaaagttaaatttgttctgagccttgtt
ttccgtgttatgcagagagagaaagtacttatcttctgccacaaccttgcacctgtgaag
ttattgatagagttatttgagatgttcttcaaatggaaaaaagatagagaaattctgctg
cttagtggggaactagacctctttgaacgcgggaaagtgatagataagtttgaggagcat
ggaggagcatcaaaggtactccttgcttcaattacagcttgtgctgaaggcattagttta
acagcagcttctagagtgatttttttggactcagaatggaatccatcgaaaacaaaacag
gctattgcacgggcttttcgtcctggtcaagaaaaaatggtttacgtttatcagctcttg
gtaacaggcacattggaggaagataagtacaaaagaaccacttggaaagagtgggtttct
agcatgatttttagtgaggcttttgaggagaacctttcacattcgcgagcagtgaacatt
gaagatgatatactgagggaaatggttgaggaggacaagtctaaaacaattcatatgatt
ctaaagaatgaaaaggcttcaacaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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