KEGG   Glycine max (soybean): 100783068
Entry
100783068         CDS       T01710                                 
Name
(RefSeq) 5'-3' exoribonuclease 3 isoform X2
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03008  Ribosome biogenesis in eukaryotes
gmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100783068
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100783068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmx03021]
    100783068
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100783068
   03009 Ribosome biogenesis [BR:gmx03009]
    100783068
   03016 Transfer RNA biogenesis [BR:gmx03016]
    100783068
Transcription machinery [BR:gmx03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100783068
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     100783068
Ribosome biogenesis [BR:gmx03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    100783068
Transfer RNA biogenesis [BR:gmx03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    100783068
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 100783068
NCBI-ProteinID: XP_003549459
UniProt: I1MY22
Position
17:41215732..41227560
AA seq 1065 aa
MGVPAFYRWLAEKYPMVIVDAIEEEAVVIDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIH
PCFHPEDRPSPTSFDEVFECMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
AAKDAADAAAEETRLREEFEKEGRKLPPKGESQTFDSNVITPGTEFMAVLSIALQYYVHL
RLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIMLA
LATHEIHFSILREVVFTPGQDKCFLCGQMGHMAANCEGKAKRKAGEFDEKGEAIVAKKPF
QFLNIWTLREYLEYEMRIPNPPFEIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGAIN
LLIAVYKKEFREFGGYLTNGSTINLSKVEHFIQAVGSYEDKIFQKRARLHQRQTERIKRE
KAQARRGDDAEPQFKPESLVAVSRFHGSRLASAPNPSPFQPSGHYNSQVSASVRKDNKEA
FERPYKVARVSSGATVAAAIVEAENNLEIDAQDNKDELKTKLKEILREKSDVFNSKNAEE
DKIKLGEPGWKERYYDEKFSAKTPEELEAIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFY
PYHYAPFASDLKGLGELDISFKLGTPFKPYDQLLGVFPAASSHALPEPYRRLMTDPSSPI
IDFYPVDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIENLLTPEEKRRNAIMFDLLF
VNSCHPLSACISTLDNKCKNMPNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIFRSP
VASMEDIMDNHVICAIYRLPDAHTHITRPPQGVKFPKKIVGIEDLKPEPVLWHEDSGRRH
HAENGRKNPPGSISGRELGDAAHRLIVNSLQAKVDTNGYRHPHNGPPISYPAPMGHHRQP
LPSHGYESCPGYVAMPPPISAPSLQGRPQFAPYNAVPTAPQYGYNQPYPAPPVGYNHPRQ
QSNPVERNDYQHPRSHNYERNHHQGSGGSSRHGYQSSGNNHNARFNNSHGSHHSQSFQPR
AHQNWTPRNNPSGHRDHGQYSSNQYSLLDRRGNRNQMPPPGYSRK
NT seq 3198 nt   +upstreamnt  +downstreamnt
atgggagtcccagcgttctaccgatggctggcggagaagtatccgatggtgattgtggac
gcgatcgaagaggaagcggtcgtaatcgacggcgttcaaatccccgtcgatacgagcaac
aagaaccctaacaacatcgaatacgataacctctatctcgacatgaatggcatcattcat
ccttgctttcaccccgaggataggccgtctccgacgtcgtttgatgaggtgtttgagtgc
atgttcgactacattgacagactattcgtcatggtgcggccgcggaagctgctctatatg
gctattgacggtgttgcgccgagggcgaaaatgaaccagcagcggtctaggcggtttagg
gctgcgaaagatgcagctgatgcggctgctgaagaaacaaggttaagggaggaatttgag
aaggagggaagaaagcttcctcctaaaggagagtcacagacttttgattcaaatgtcatt
acacctggaactgaatttatggctgttttgtcaattgcacttcagtactatgttcatctt
aggttgaacaatgaccctggttggcaaaatattaaggttattctttctgatgcaaatgtt
cctggtgaaggggagcataagattatgtcctatatccgcctgcagagaaatcttaaaggt
tatgatccaaatacacgacattgcctctatggtttggatgctgatttgattatgttggca
ttggctacccatgaaattcatttttcaattcttagagaggttgtatttactcctggacaa
gacaaatgcttcctctgtggtcagatgggtcatatggctgcaaactgtgaaggaaaggca
aaaaggaaggcaggagagtttgatgaaaaaggagaggctattgtggcgaaaaagcccttc
cagttcctaaatatatggactctgagagaatatctggagtatgagatgagaatacctaat
cctcctttcgagattgattttgaatgcattgtggatgattttatcttcatgtgttttttt
gtcggcaatgattttctaccacacatgcctacactagagattcgtgagggtgcaattaac
ttgctgatagcagtatacaagaaggaatttagggaattcggtggttatttaaccaatgga
agcacgataaatttgagcaaggtggagcacttcattcaggctgttggatcttatgaagat
aaaatattccagaaaagagctcgattgcatcagcgacaaacagaaagaataaagcgtgaa
aaggcacaggcaaggaggggagatgatgctgagcctcaatttaaaccagagtctttagtt
gcagtttcacgattccatggttctcgtcttgcttcagctccaaatccttcaccatttcaa
ccatctgggcattataattctcaagtgtctgcatcagttagaaaagacaataaagaagcc
tttgagaggccttataaagttgctagggtttcttcaggagcaactgttgctgctgctatt
gttgaagctgagaataatcttgaaatagatgctcaagataataaagatgaattgaaaaca
aaattaaaggagatacttcgtgagaaatctgatgtattcaactcaaagaatgctgaagag
gataagattaaattgggagaacctggctggaaagagaggtattatgatgaaaaattttct
gccaaaactcctgaggaacttgaagcgatacgtaaagatgttgtcttgaaatacactgaa
gggctatgttgggtgatgcactattattatgaaggtgtttgttcttggaattggttttat
ccttatcactatgctccctttgcgtctgatctcaagggccttggtgaacttgatattagc
tttaagctgggtaccccattcaaaccatatgaccagcttctaggggtttttcctgctgca
agctctcatgcacttcctgagccatataggagacttatgactgatccaagctcaccaatc
attgatttttatccagttgactttgaagtggacatgaatggcaaacgctttgcttggcag
ggtattgctaagttgccatttattgatgaagtgcgtcttcttgcagaagttcaaaagatt
gaaaacttgttaacaccagaggaaaagcgacggaatgctataatgttcgacttgctcttt
gtgaattcttgtcatcctctctctgcgtgcataagtacacttgacaacaagtgtaaaaac
atgcccaacagtgaacgggctgtggtcaaggaaaaaatcaatcccaaagaaagtggtgga
atgaatggttacatatccttatgtggtggagaaccttgccctcctatctttaggtctcct
gtcgcaagcatggaagatatcatggacaatcatgttatatgtgcaatatacagactccca
gatgcacatacacacattacccgaccacctcaaggagttaaatttccaaaaaagattgtt
ggaattgaggatttaaaacctgaacctgttttgtggcatgaagattcaggcaggagacac
catgctgaaaatgggaggaaaaaccctccaggatctatttctggtcgggagcttggggat
gcagcacacagactcatcgtcaattccttacaggcaaaggttgatactaatggataccgc
catccgcataatggtcctcctatatcttatcctgcacccatgggtcatcatcgacaacca
ttgccttcacatggttatgaatcatgcccgggatacgttgcaatgccgccacctatttca
gctccctcactccaaggcagaccacagtttgcaccttacaatgctgtccctactgctccg
cagtatggttataatcaaccataccctgcgccaccggtggggtacaatcatcctcgccag
caatcaaatcctgtcgaaagaaatgactatcaacaccctagatcacataattatgaaaga
aatcaccatcaaggtagtgggggtagttcaaggcatggatatcaatcatcaggaaataat
cacaatgctaggtttaataattcacatggtagtcaccacagccaaagcttccaacctaga
gctcatcagaattggactccacgaaacaacccgagtgggcacagggatcatggtcagtat
tcgtccaatcaatattctttgttagatagaagaggaaacaggaatcaaatgccaccacct
ggttacagtcgcaaataa

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