KEGG T01710: 100790070

Glycine max (soybean): 100790070

Entry

100790070 CDS T01710

Definition

replication factor C subunit 1-like

Orthology

K10754

replication factor C subunit 1

Organism

gmx Glycine max (soybean)

Pathway

gmx03030	DNA replication
gmx03420	Nucleotide excision repair
gmx03430	Mismatch repair

Module

gmx_M00289

RF-C complex

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:gmx03030]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:gmx03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:gmx03430]

SSDB

Motif

Pfam:

RFC1 BRCT AAA PTCB-BRCT Rad17 AAA_17 AAA_22 DNA_pol3_delta RuvB_N Sigma54_activ_2 Zeta_toxin AAA_5 Proteasome_A_N AAA_16

Other DBs

NCBI-GI:

356544778

NCBI-GeneID:

100790070

Position

AA seq 1112 aa
MRYVAVQLYAAHNSDAGRMGYFLVQVVLFRRKPYVIISVVALEKAGTSEILAILPGYPDN
VRVNEEGDFWVALHCRRYMFAYYNGIYPEIRKIILKLPIPIKIQYLIQIGGHQHAAVIRY
SPEGRLLQILEDSEGKVVKAVSEVEEKDGKLWMGSVLMPFVASDIRKWFMKTHDKGNNAA
SSKPSNQPKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNKQKGKDKKEMQELPAKRKNM
KDSEEIPEPKKIHEDDGDDSVLPTNKKKLADTTPTKKLKSGSGRGLPQKSAVLEESDEDD
DKDAVSAAKSAGRGDGGRGAPGRSTSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPD
CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKQL
GTSFLTEDGLFDMIRGSKPAKAPSQEDKKPVNKAVAVASQSKVSPKSQSTNAVPLSSRSP
SNQAKPKTATTVQSSLMWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQG
KKQNDSGLKKAVLLSGTPGIGKTTSATLVCQELGFQAIEVNASDSRGKADSKIEKGISGS
KTNSVKELVTNEAIGINMGRSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIIC
ICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVAKAERLQVNEIALEELAERVNGD
MRMALNQLQYMSLSMSIINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERIN
LSMSDPDLVPLIIQENYINYRPSMAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQ
WQLSQTSSVATSIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHI
LASRESSSGRDTIRMEYLTLLLKQMTETLRTLPKAEAVQQVVEFMNTYSISQEDFDTIVE
LSKFKGHPNPLDGIQPAVKSALTKEYKEQSTSRVVRVADLITLPGVKKVPKKRIAAILEP
AGEEVEKGEGDALDESEEENSSDTEELEGTTKGEKLQSELQSLNSKATQVQLELKGTGNS
SSKKTSGGRGKGVSVSGKKVAQAPKTTAKRKR

NT seq 3339 nt +upstreamnt +downstreamnt
atgagatatgtggctgtgcagttgtatgcagctcataatagtgatgcaggaaggatggga
tattttttggtgcaagtagtattgtttcggaggaagccatatgtgattatttctgtggtg
gcattagaaaaagctgggacttcagagattttagccatcctacccggatatcctgacaat
gtgagagtcaatgaagaaggtgatttttgggtagctcttcattgtagaagatatatgttt
gcatactacaatggtatctacccagagataaggaaaatcatactcaagcttcctataccg
ataaagattcaatacctgattcaaataggaggtcaccaacatgcagcagttatcaggtat
agccctgaaggtagacttttgcagattttggaggacagtgaggggaaagttgttaaagca
gtgagtgaagtggaggagaaggatggtaaactatggatgggaagtgttcttatgcctttt
gttgcgagtgatataaggaagtggttcatgaaaacacatgacaagggcaacaatgccgct
tcctccaagccttccaatcaacctaagccttcttccgataaaccccagtccgagaaaacg
gtggctggaggtcaggaaagttcagggaggaggataactagcaaatattttaattctaac
aagcaaaaggggaaagacaagaaagaaatgcaggagctccctgctaaaagaaagaatatg
aaggacagtgaggaaataccggagccaaagaaaattcatgaagatgatggagatgactct
gtgttgcccactaataaaaagaagttagctgacaccactccaacaaagaagttgaagagt
ggatcaggtagggggcttccccagaaatctgcagttttggaagaaagtgatgaagatgat
gacaaagatgctgtgtctgctgctaaatctgctggaaggggtgatggtggaagaggagca
ccagggcgatcaactagtgggagaggtagagggggtgggaggggtggattcatgaatttt
ggagaaagaaaagatcctccacacaaaggagaaaaggaagtccctgaaggtgctcctgac
tgtttagctggcttgacttttgtgatcagtggaacactggacagtttggaacgagaagaa
gcagaagatttgattaaacgccatggcggccgtgtcactggatcagtcagcaagaaaacg
aattatctgttatgtgatgaagatattggggggcggaagtctgaaaaagccaaacagcta
ggaacttccttcctcacagaggatggtttgtttgatatgattcgtggctcaaaacctgca
aaagctccttcacaagaagacaagaaacctgtgaataaggctgttgcagtagcatcccag
tcaaaagtttctccgaaatcacagtcaacaaatgcagtccctctgtcttcacgctcacct
tctaaccaagccaagccaaagactgctactactgttcagtcttctttgatgtggactgaa
aaatatcgacctaaagatccaaaggatatcatagggaatcagtcacttgttttacagctt
cgtaattggttgaaagcttggaatgagcattttttggacactggtaacaaaaagcaggga
aaaaagcaaaatgactctggtttgaaaaaagctgtcttgttaagtggaactcctggtatt
ggaaaaacaacttctgcgacgttggtctgtcaggagcttggtttccaagccatagaggta
aatgctagtgatagccgtggaaaagctgatagcaaaattgaaaaaggaattagtggaagc
aagacaaattctgttaaggaacttgtaaccaacgaggccattggtattaatatgggacgg
tcaaagcattacaaatctgtgctcattatggatgaagttgatgggatgtcagctggtgat
aggggtggtgttgctgatcttattgctagcatcaagatatcaaaaattcctattatctgc
atttgcaatgaccgttacagccagaaactgaaaagccttgtgaactactgtttgcttcta
agttttcggaagcctacaaagcaacagatggcaaagaggttgatggatgttgcaaaggct
gaaagacttcaagttaatgagattgcacttgaggaattagcagaaagagttaatggagat
atgcgaatggcactaaaccagttacagtatatgagcctctctatgtcaattatcaactat
gatgatattaggcagcgctttcttaccaatgcaaaagatgaagacatttcaccattcaca
gctgttgataagctttttggttttaatgctgggaagttgaaaatggatgagaggataaat
cttagcatgagtgatcctgatcttgttcctcttattatccaggaaaattatattaattat
agaccaagcatggctggtaaggatgacagtggcataaaacgcatgaacctgattgcccgt
gctgctgagtctattgctgatggggatatagtgaatgtacagattcgcagatatcgacag
tggcagctctctcaaactagttctgttgctacaagcataattcctgcgtcattgttacac
gggcagagggaaatacttgaacagggagagcgaaatttcaaccggtttggtgggtggctg
gggaagaactcgacaatgggcaaaaacttacggcttttggatgatcttcatgttcacatt
cttgcttctcgtgaatctagttcaggaagggataccattcgcatggaataccttactctt
cttcttaaacaaatgacagagaccctgcgaaccctgcccaaggctgaagcagttcagcaa
gttgtggaatttatgaatacatactctatcagtcaggaagattttgatactattgtagag
ttgtcaaaattcaagggtcatcctaatccactagatggcatacagcctgccgttaagtca
gccttgacaaaagaatacaaagagcaaagcacatctcgagttgttcgagttgcagatcta
atcactcttcctggagtaaagaaggtccctaagaagcgtattgctgctattctggaacca
gctggcgaagaagtggaaaaaggtgaaggtgatgccttggacgagagtgaagaggagaac
agctctgatacagaagagttggagggcaccaccaagggtgagaagctgcaatcagaactt
caaagcttgaattcaaaggccacgcaagtacagttggaactgaagggaacgggaaattca
agttctaagaagacatcgggtggtagaggtaaaggtgtttctgtatctgggaagaaggtt
gctcaagctccaaagactactgcaaaaagaaaaaggtga

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (27)   

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