KEGG   Glycine max (soybean): 100791226
Entry
100791226         CDS       T01710                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52B
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
gmx  Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100791226
   03041 Spliceosome [BR:gmx03041]
    100791226
   03036 Chromosome and associated proteins [BR:gmx03036]
    100791226
Enzymes [BR:gmx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100791226
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100791226
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100791226
Spliceosome [BR:gmx03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    100791226
Chromosome and associated proteins [BR:gmx03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    100791226
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 100791226
NCBI-ProteinID: XP_003550826
UniProt: A0A0R4J5P6
Position
17:complement(9144891..9147942)
AA seq 610 aa
MLWSYASHYVPPQHRTNSFQTLTDDSTSRGGARPRDGGRGGSGSRGFSRPRIPSNRLPVE
EPQDGSDAINFDAYESVPVEASGKDVPPPVNTFNEADLDEGLKRNIDRCKYVKPTPVQRH
AIPIASAGRDLMACAQTGSGKTAAFCFPIISGILKGRSLSGFSSMPARGAAVAYPTALIL
SPTRELSCQIRDEANKYAHQTGVKVVVAYGGAPITQQLRLMEKGVDILVATPGRLVDIIE
RERVSLTKIKYLALDEADRMLDMGFEHQIRKIVEQMQMPSPGIRQTLLFSATFPNDIQKL
ASDFLSNYIFLSVGRVGSSTELIVQKIELVQDMDKRDHLINHLRRQKVHGANGKHALTLV
FVETKRGADVLEGWLLRSGFSAVAIHGDKVQMERERALRSFKSGLTPILVATDVASRGLD
IPHVAHVINFDLPRDIDNYVHRIGRTGRAGKSGLATAFFSDKNSPIAKALIGLLQEANQE
VPSWLNQYATEGSSSGGGGRGYEAQRYRSGSYGGHDFRNVTEPEVQNYNCYNTNGNAVQF
VESYTADDASYVDTSYDIQNSNIDCSFECLHIASSGSYNHTDSCELNGGGGRVEEDGPRG
YASIVATGWD
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgctgtggtcttatgcctcgcactatgtccctccacaacaccgcactaacagcttccaa
accttaaccgatgattcaaccagccgtggtggcgctagaccacgtgacggtggccgcggt
ggttccggcagccgtgggttttctcgtccccgcattccttctaaccggttacccgtggag
gaaccacaagacggcagcgacgctattaacttcgacgcgtacgagtcggtaccggtggag
gcgagtgggaaggacgtgccaccgccggtgaacaccttcaatgaagcggacttggacgaa
ggtttaaagaggaacatcgaccgatgcaagtatgtgaaacccacgccggttcagcgccac
gcgattcccatcgcgagtgcgggacgcgacctaatggcgtgcgcacagaccggttcgggc
aaaacggcagcgttttgttttcccattatatctgggattttgaagggtcgttctctttct
gggttttcatcaatgccggctcgtggtgccgctgttgcataccccactgcacttattctg
tctcctaccagggagttatcatgccagatacgcgatgaagcgaataaatatgcgcatcaa
actggagtgaaggttgttgttgcctacggtggggctcctattactcagcagctgcgcctt
atggagaaaggtgttgatatattggttgcaactcctgggcgtttggtggatattattgaa
agagaaagggtttcgttgacaaagataaagtatcttgctttggatgaggctgatcgtatg
ttggacatgggttttgaacaccaaatacgcaagattgtggagcaaatgcagatgccctcg
ccaggtattaggcaaacattgttgtttagtgccacgtttcctaatgatatacagaagcta
gcatcggactttttatccaactacatattcctgtctgttggaagggttggatcgagtact
gaactgattgtgcagaagattgagcttgtacaggatatggacaaaagggaccatcttatt
aatcatctgcgacgtcaaaaggtgcatggggcaaatgggaagcatgctttgactcttgta
tttgttgaaaccaaaagaggagcggatgttttagaaggttggttgttgagaagtggcttt
tcagctgttgccatacatggtgacaaagttcaaatggaaagggaacgggctttaagatca
ttcaaatctggtttgactcccattttggttgcaactgatgttgcttcacggggattggat
atcccgcatgtggctcatgttataaactttgacttgcctagagacattgataactacgta
catagaattggaagaacaggccgtgcaggcaaatctgggttagccactgccttcttcagc
gacaagaatagccctattgcaaaggctcttattggactcttgcaggaagcaaaccaagaa
gttccatcttggctcaaccaatatgctactgagggttcatcatctggtgggggtggtcgt
ggctatgaagctcagcgttaccgcagtggcagttatggtggtcatgatttccggaatgtc
actgaacctgaggtgcagaattacaactgctacaataccaatggcaatgcagttcagttt
gtagagtcttacactgctgatgatgcctcttacgttgatacctcctatgacatccaaaac
tccaatatagattgctcttttgaatgtttacatatagcttcttccggcagttataatcac
actgattcttgtgagttgaatggaggtggtggtagggttgaagaagatgggccacgcggt
tatgcatctattgttgccactggatgggattag

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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