KEGG   Glycine max (soybean): 100796154
Entry
100796154         CDS       T01710                                 
Name
(RefSeq) exosome complex component CSL4-like
  KO
K07573  exosome complex component CSL4
Organism
gmx  Glycine max (soybean)
Pathway
gmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100796154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100796154
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100796154
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     100796154
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 100796154
NCBI-ProteinID: NP_001242874
UniProt: C6TFN8
Position
10:40294711..40297278
AA seq 197 aa
MEEEKEAVMVTPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDLRPT
VEVTGHKAHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGIIRQQDVRATE
IDKVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEMQ
CPLTGQIEQRKVAKAAS
NT seq 594 nt   +upstreamnt  +downstreamnt
atggaagaagagaaagaagcagtgatggtaacaccgggagaagtgttgggtagaaccagc
gatgtcaaagctggaagaggagcatacgcggcgcttcacaacaacaccgtatacgcctcc
ctaaccggcttccgccacaccgtacctcccgcccccgactcttccgacctgagaccgact
gttgaagtaactggtcacaaggcccatggacctgttccacagcctggatctgtagtcatt
gctcgggtcaccaaagtgatggctcggtccgcttcagctgatattatgtgtgttggacca
aagtctgttcgagaaaaatttactggcatcattaggcagcaagatgttagagcgactgag
attgataaagtagacatgcacttgtcttttcatcctggtgacattgttagagcccttgtg
ctttctcttggagatgcacgggcgtactttctgtctactgcaaagaatgaacttggtgtt
gtttctgcagaaagcattgctggtgcaactatggttccagtaagttggacagagatgcag
tgcccgttaactggtcaaattgagcaaagaaaggttgcaaaggctgcaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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