KEGG   Glycine max (soybean): 100802600
Entry
100802600         CDS       T01710                                 
Name
(RefSeq) coatomer subunit alpha-2
  KO
K05236  coatomer subunit alpha
Organism
gmx  Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmx04131]
    100802600
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmx04147]
    100802600
Membrane trafficking [BR:gmx04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100802600
Exosome [BR:gmx04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100802600
  Exosomal proteins of bladder cancer cells
   100802600
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 100802600
NCBI-ProteinID: XP_006592088
UniProt: I1LPY8
Position
12:2809160..2815551
AA seq 1221 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
NSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDIVVSASLDQTVRVWDIGSLKRKAGPPADDVLR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILSTHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYTKDRFLRFYEFSTQRETQVLTIRRPG
SSCLNQSPKSLSYSPTENAILLCSDVDGGSYELYCISKDGTKDSFGRGDTQDPKKGLGGS
AVFVARNRFAVLDKGSNQVCVKNLKNELVKKSALPISADAIFYAGTGNLLCRSEDRVFIF
DLQQRIVLGDLQTPFIKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAW
DDNGIFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVVGNTIFCLGRDGKNKAITVDAT
EYIFKLSLLKKKYDHVMNMIKNSQLCGQAMIAYLQQKGFPEVALHFVKDERIRFNLALES
GNIQIAVASATAIDEKDHWYRLGVEALRQGNSGIVEYAYQRTKNFERLSFLYLITGNVEK
LSKMLKIAEVKNDVMGQFHNALYMGDIRERVKILENAGHLPLAYITASVHGLHDVAERLA
AELGDNVPSVPEGKVQSLLMPPSPVVCGGDWPLLRVMRGIFEGGFNNTDRDADDEEYEAA
DGDWVEELDMVDVDGLQNGDVAAILDGVEVAEDDDEEGGWELEDLELPPEADTPKVSVSS
QSSVFVAPAPGMAVGQIWIQRSSLAADHVAAGNFDTAMRLLNRQLGIRNFAPLKSMFLDL
HTGSHSYLRAFSSAPVVSIAVERGWTESSSPNVRGPPALPFRLSQLDEKLKVGYKSTTAG
KFTDALRTFVNILHTIPLIVVESRREVDELKELIIIVKEYVLGLQMELKRREIKDNPARQ
QELAAYFTHSNLQTPHLRLALLNAMTVCYKAKNLATAANFARRLLETNPTVENQAKTARQ
VLAAAEKNMTDALQLNYDFRNPFVICGATYVPIYRGQKDISCPYCTSRFVPSQEGQLCAV
CELSVVGADASGLLCSPAQIR
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgctgaccaagttcgagaccaaaagtaatagagtgaagggactcagtttccacagcaag
agaccctggatcctcgcgagtcttcacagtggcgtgatccaactatgggattaccgaatg
gggactctcattgacagattcgatgagcatgatggtcctgtcagaggtgtccatttccac
aattctcagcccctctttgtctctggaggggatgattacaagattaaggtttggaactat
aagatgcataggtgtttgttcactcttctaggacaccttgattatatccgtactgtgcaa
tttcatcatgagaacccgtggattgtgagtgccagtgatgatcagaccattcgcatttgg
aactggcagtcacgtacctgtatatctgttttaactgggcataatcattatgttatgtgt
gcttcattccatccaaaagaggatattgttgtgtcagcctccctggatcaaactgttcgt
gtttgggatattggttctctcaaaaggaaggccgggcctcctgcagatgacgtcctacga
ttgagtcagatgaacacagatctttttggaggtgttgatgcagttgttaagtatgtattg
gaaggtcatgaccggggtgtcaactgggctgcttttcatcctacactgcctttgattgtc
tcaggagctgatgaccgacaagtgaaactttggaggatgaatgacaccaaggcatgggaa
gtggatactctgagaggacacatgaataatgtttcatgtgttatgttccatgccaaacag
gacatcattgtgtcaaattctgaggataaaagtatccgagtatgggatgccacaaagcgg
actggaattcaaactttccgcagagagcatgatcggttttggattctatctacacatcct
gaaatgaatttgttggcagctggtcatgacagtggcatgatagtctttaagctggagaga
gaaaggcctgcttttgcagttagtggcgattctttattctacacaaaagaccgattcttg
cgtttctatgaattttcaactcagagagagacacaagtacttacaattcgacgacctggt
tcttcatgtctgaatcaaagtccaaagtctctttcctatagccctactgaaaatgcaatt
ctactctgttcagacgtggatggaggatcttatgagttgtattgcatatccaaagatggc
acaaaggacagttttggtaggggtgatacacaagatccaaagaaaggtcttggaggatct
gcagtctttgtggctcggaataggtttgctgtgcttgacaaaggcagcaaccaagtctgt
gtaaaaaatctgaagaatgagcttgtcaaaaagagtgccctccctatttctgcagatgct
atattctatgctggaacaggcaacttgctatgcaggtcagaggatagggtttttatattt
gatctacagcagaggattgttctcggtgatcttcagaccccttttataaagtatgtagta
tggtctaatgacatggaaagtgttgctctgctcagtaaacatgcgattgtcattgctagc
aagaagcttgtgcaccaatgcacactccacgagactatccgagtaaaaagtggagcctgg
gatgacaatggcatttttatttacacaacattaaatcatataaaatattgcctccccaat
ggagatagtgggataattaaaacattggatgtcccaatttatattacaaaggttgttgga
aacaccatcttctgcttgggtcgggatgggaaaaacaaagctataactgttgatgcaaca
gaatatatctttaagctttccttgttgaagaaaaaatatgatcatgtaatgaacatgata
aagaattcgcagctttgtgggcaggctatgattgcttatctacaacagaaagggtttcct
gaagttgcgctccattttgtgaaagatgagagaatccgattcaatttggctttggagagt
ggcaacattcaaattgcagttgcatcagcaacagcaatcgatgaaaaagatcactggtat
cgattaggggttgaagctcttcgtcaaggtaactctggtatagtagagtatgcgtaccag
aggactaaaaattttgagaggttgtcattcctttatctcattactggtaacgtggagaaa
ctttcaaaaatgttgaaaattgctgaagtgaagaatgatgtgatgggccagtttcacaat
gcgctatatatgggtgacatcagagagcgtgttaagatcttggagaatgcggggcatttg
cctcttgcttacatcactgcttcagtccatgggctgcatgatgttgctgaaaggcttgca
gctgaactgggggataatgttccatctgtgcctgagggaaaagtacaatctctcttgatg
ccaccatcacctgtagtgtgtggtggtgattggccccttcttagggtcatgcgaggaata
tttgaaggtggttttaacaatacagatcgtgatgctgatgatgaagagtatgaggctgct
gatggtgactgggttgaggagcttgacatggttgatgtagatgggttacaaaatggagat
gttgctgcaattttggatggtgtagaagtggcggaagatgatgacgaagaaggtggatgg
gagctggaagatttagagcttccccctgaagctgacacgccaaaagtttctgtcagttcg
caatcttcagtttttgtggccccagcacctgggatggcagttggccagatatggattcag
agatcatctcttgcagctgatcatgtagctgctggcaattttgatactgcaatgagatta
ctgaacaggcaactcgggataaggaactttgcccccttgaaatctatgtttctagatcta
catactggcagtcattcctatctgcgtgccttttcatccgctccagttgtatcaattgct
gttgaaagaggttggactgagtcatctagtccaaatgtgagaggcccaccagcacttcct
ttcagattgtctcaattagatgaaaaactcaaagttggatacaagtcaacaactgctggg
aaatttactgatgctcttcgcacttttgtcaatattcttcatacaattcctttgattgtt
gttgagtcaaggagagaggttgatgaactgaaagaattgattatcatagtgaaagagtat
gtcttgggtctgcagatggagctgaaaagaagggaaattaaggacaatccagcacgccag
caagagcttgcagcttatttcacccacagcaatcttcaaacacctcacttgaggctagct
ttgctgaatgccatgactgtctgctacaaggcaaagaaccttgccacagccgctaacttt
gccaggaggctacttgagaccaatcctactgttgaaaaccaagctaagacagcaaggcaa
gtgctggcagctgcagaaaagaatatgactgatgccttacaattgaactatgatttccga
aacccatttgtaatttgtggagcaacctatgtgcccatttatcgtggacagaaggatatc
tcttgcccctattgtacttcccgttttgtgccaagccaggaggggcagctatgtgctgtg
tgtgagctttcagtggtaggggcggatgcttctggattgctctgctctcctgcccaaatt
cgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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