KEGG   Glycine max (soybean): 100804872
Entry
100804872         CDS       T01710                                 
Name
(RefSeq) protein RRP6-like 2 isoform X2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100804872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100804872
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     100804872
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT
Other DBs
NCBI-GeneID: 100804872
NCBI-ProteinID: XP_003554038
UniProt: K7MXW4
Position
19:37490932..37511368
AA seq 643 aa
MDFDHHLTELSASSPFIPSGEDFHFYYKFRNFRRPIEEIARRTQSMLDRIGSAENIWGRG
SAFPGDVDDAYEWLVNANDDVLELVEELVDELRMLKKDEGEECDGANPKVPFHIPTIKKP
QYAYNIVVDNSNEPFEHILLEKSDDGQRYIHPLEKLSVLDFVDKENLENLVPVEPPSIEC
TPFKLVEDVKGLKEVAAMLSSVNEFAVDLEHNHYRSFQGLTCLMQISTRTEDFVIDTLKV
RNHVGPYLREVFKDPTKKKVMHGADRDIVWLQRDFGIYVCNMFDTGQSSRVLKLDRYSLQ
YLLQQFCGVTANKEYQSADWRLRPLPDVMLRYGREDTHYLLYIYDLMRIKLFALSKESEG
SDNPLLEVYKRSYDVCMQLYEKELLKEDSYLHIWGLRGAGFNAQQLAVVSGLWEWRDGLA
RADDEGPGYVLPNRIILEIANQMPVIISNLRRIVGRTKHPYVERSLDVIVNIVRHSMQNA
AAFEEAALRLKEEHAASLSNVIPVKDGTEVPHTLQKDGCAARGSMGIENGSCVDITQNCM
LSYDQEEKSFQHQVEDGLSDCLNSDLLRVKKEIKPEQSRSSLNIPSPLLLGNNEKSRLVA
ETPSVTYETSYSREKLVSGSPSTSNPIGMVMVDSAKEKKMNDE
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggacttcgatcaccacctcacggagctttccgcctcctcgccgttcattccatccggc
gaggacttccacttctactacaaattcaggaacttccgccgcccgatcgaggaaattgcg
aggagaacgcagtcgatgctcgacagaatcggctccgcggagaacatttggggcagaggc
tcggcgttccccggtgacgtcgacgacgcgtacgagtggctcgtgaacgcgaatgacgac
gttttggagctggtggaggagctggtggacgagttgcggatgctcaagaaggacgaggga
gaggaatgtgacggcgcgaatccgaaagtgccgtttcatataccgacgatcaagaagccc
cagtatgcgtacaacattgtggttgataattcaaacgagccttttgagcatattttgttg
gagaagagtgatgatggtcagcgttacattcatccactggagaaactctctgttttggat
tttgttgataaagaaaatctcgagaatcttgtgccagtagagcctccctcaatagaatgc
acccctttcaagcttgtggaggatgtcaaaggattgaaggaggtggctgctatgctgtct
tcagttaatgaatttgcggtggatttggaacataatcattatcggtctttccaaggtttg
acttgcttgatgcaaatctcaaccaggactgaagattttgttatagatactctgaaggtc
cgcaatcatgttgggccatacctgagggaagtcttcaaggaccctaccaagaagaaggtc
atgcatggagcagatcgagacattgtgtggctgcaacgggattttggcatttatgtttgc
aatatgttcgatactggccagtcttcaagagtgttaaagttggacagatatagtctgcaa
tatcttttgcaacagttttgtggggttactgcaaacaaggaataccagagtgcagattgg
agattacgccctcttcctgatgtgatgctaagatatggcagagaagatacacactatctg
ctttatatatatgatttaatgaggatcaaattatttgcattgtctaaggagtctgaaggt
tctgataatcctctactggaggtttacaagcgcagttatgatgtctgcatgcagctatac
gagaaagagctgctgaaagaagactcgtaccttcatatatgggggttgcgaggggctggt
tttaatgctcagcagcttgccgttgtttcaggactttgggaatggcgtgacggtcttgct
cgtgcagacgatgaaggtcctggctatgtattgccaaatagaattattcttgaaatcgct
aaccagatgcctgtcattataagcaatctacggcgaatagtaggaaggacaaaacaccca
tatgttgagcgcagccttgatgtcattgtcaacattgtcagacattctatgcaaaatgct
gctgcctttgaagaggctgcactacgtttgaaagaagaacatgctgcaagtttgtcaaat
gtgatacccgttaaggatggaactgaagtacctcatacactacaaaaggatggatgtgca
gcaagaggaagcatgggaattgaaaatggctcctgtgttgatatcacacaaaactgtatg
ctttcttatgaccaagaggagaaaagttttcagcatcaagttgaagatggactatccgat
tgtctcaattcagatctactaagggtcaagaaggagatcaagccggaacagagtagatcg
tcgttaaatattccatctcccttattgttgggcaacaatgagaagtcaagactagttgca
gaaactccaagtgtaacatatgaaacatcatactcacgggagaaacttgtttcaggttca
ccttctacctccaaccctattgggatggtaatggtagattcagccaaggaaaagaagatg
aacgatgagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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