KEGG   Glycine max (soybean): 100807381
Entry
100807381         CDS       T01710                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
gmx  Glycine max (soybean)
Pathway
gmx03018  RNA degradation
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100807381
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100807381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100807381
   03041 Spliceosome [BR:gmx03041]
    100807381
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100807381
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100807381
Spliceosome [BR:gmx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100807381
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 100807381
NCBI-ProteinID: XP_003524910
UniProt: A0A0R4J3D2
Position
5:complement(34397994..34401407)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcgggcagaaaggaaacggttttggaccttgcaaagtttgtagacaaaggcgttcaa
gttaagcttactggtggcagacaagtgacagggactctgaaagggtatgatcagttgctt
aaccttgtcctagatgaagctgtagagtttttaagagatcctgatgatcccctcaaaact
accgatcagaccagaaatcttggcttaattgtttgtagaggaactgctgtcatgcttgtg
tccccaactgatggtacagatgagatcgccaacccctttatacagccagatgggtcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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