KEGG   Glaciecola nitratireducens: GNIT_0071
Entry
GNIT_0071         CDS       T01632                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
gni  Glaciecola nitratireducens
Brite
KEGG Orthology (KO) [BR:gni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gni03400]
    GNIT_0071 (rep)
Enzymes [BR:gni01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GNIT_0071 (rep)
DNA repair and recombination proteins [BR:gni03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GNIT_0071 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: AEP28226
UniProt: G4QEW3
Position
75353..77359
AA seq 668 aa
MRLNDAQQEAVEYVSGPCLVLAGAGSGKTRVITNKIAYLVRECGYKARQIAAVTFTNKAA
REMKERVGQTLGKAEARGLKVSTFHTLGLSIIKKHVLQLGYKAGFSLFDDKDSMSLIRDL
TEAEYDGDKELLSALQSQISNWKNDLIMPEAALKLARGDSEVEQAKYYVEYASHLKAYNA
LDFDDLILLPTLLLKTNDAVREKWQSMLKYLLVDEYQDTNTSQYELVRLLVGPRARFTVV
GDDDQSIYSWRGARPQNLVLLQKDFPSLRLIKLEQNYRSSGRILHNANILIQNNPHVYDK
RLFSELAYGEKLKVVVAKNEEHEAEKVVAELMAHRFMNNTGYGDYAILYRGNHQSRLFEK
VLMTNRIPYKISGGTSFFGRTEVKDVMAYLRLLVNQDDDNALLRVINTPSRGIGRATLEK
VGHFSNANKTGLFEACCHSGLNSILGAKAYQSIEQFSRWVVEAADNAHRGDTIAVLRDFI
KAMGYEEWLYEQSTSPKAAEMAMANVSTLFGWVDSMLKGDELEPPMSLSEIVNRLILRDM
MERGEDDAEADQVQLMTLHASKGLEFPYVFMVGMEEGLLPHQSSIDEDNVDEERRLAYVG
ITRAQKELVFSIARERRQFGEIIQPEPSRFLYELPQDDVEWEFQKKKPTADERKEKGAKG
IANLRDLL
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgcgcttaaatgacgcccaacaagaagccgttgaatatgtatcgggtccatgcctagtg
ctcgcaggcgcaggcagcggtaaaacacgcgttattaccaataaaatagcctacttagtg
cgagagtgcggttataaagcgaggcaaattgcagcagttacgtttactaacaaagctgcg
cgagaaatgaaggagcgggttgggcaaacgcttggcaaagccgaagctcgtggtttgaaa
gtgtcgacattccacacgcttggactaagtattatcaaaaaacatgttttgcagcttggc
tataaagcgggcttttcattgttcgatgacaaagattcaatgagtttaatacgcgacctt
accgaagctgaatacgatggtgacaaagaattactgtctgcattgcagtcgcaaatttcc
aattggaagaacgatttgatcatgccagaagctgcattgaaactggctcgcggtgatagc
gaagttgaacaagcaaaatactacgtagaatatgcatctcacttaaaagcctacaatgcc
ttagatttcgatgaccttattttattgcccaccttgctattgaaaaccaatgatgcggtg
cgcgaaaagtggcaaagtatgctcaaatacctgctagtggatgaataccaagacaccaac
actagccaatacgaattggtccgcttgttagttggaccgcgcgccagatttaccgtggta
ggggacgacgaccaatcgatttattcatggcgtggagcgcggccacaaaacttagtgttg
ttacaaaaagactttccaagcttgcgcttaataaagctcgaacaaaactatcgttcgtca
ggccggatactgcacaacgccaatatccttattcaaaacaatccgcatgtgtatgataaa
cgcctatttagtgaattggcctacggtgaaaagcttaaagtagtcgtcgctaaaaatgag
gaacatgaagctgaaaaagtggtagctgaactaatggctcaccgctttatgaacaataca
ggttatggcgattacgcaattttgtatcgtggcaatcaccaatcgcgtttgttcgaaaaa
gtcttaatgaccaaccgtattccctataaaatcagtggcggcacgtcatttttcggccgc
acagaagtcaaagatgtgatggcgtacttacgcttattagttaatcaagacgatgataat
gcgctgttgagagtcattaatacaccttctcgtggaattgggagggcaacattggaaaag
gtggggcatttctcaaacgccaataaaacgggtttatttgaagcttgttgccacagcggc
ttaaatagtattttgggcgcaaaagcctatcaatcaattgaacagttttcccgctgggtt
gttgaggcggcggacaacgctcaccgcggagacacaattgcagtgctgcgtgattttatc
aaagccatgggttacgaagaatggttatatgagcagagtacaagtccaaaagcggcagaa
atggcgatggctaacgtgagtactttgtttggttgggttgacagcatgctgaagggcgat
gaactagagcctccaatgagcttgtctgaaatagtgaatcgactgattttacgcgacatg
atggagcgcggtgaagatgacgctgaggcggaccaagtgcaattaatgacgctgcatgca
tccaagggtctcgagtttccatatgtctttatggtgggcatggaagagggcttattgcca
caccaaagcagcattgatgaagacaatgtagatgaagaacgacgtttggcttacgttggt
attacacgggcacaaaaagagctggtgtttagtattgccagagagcgtcgtcaattcggt
gaaatcatccaaccggaaccttctcgattcctatatgagttgccacaagatgatgtggaa
tgggagtttcaaaagaaaaaaccgacggctgatgaaagaaaagaaaaaggcgctaaaggg
attgcgaatttgcgagatcttttataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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