KEGG T01163: Gobs

Geodermatophilus obscurus: Gobs_1947

Entry

Gobs_1947 CDS T01163

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

gob Geodermatophilus obscurus

Pathway

gob03410	Base excision repair
gob03420	Nucleotide excision repair
gob03430	Mismatch repair
gob03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:gob03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:gob03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:gob03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:gob03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

284990460

NCBI-GeneID:

8753618

UniProt:

D2SEV3

Position

complement(2020673..2021752)

AA seq 359 aa
MDLPLLPPVKPMLAKAVTKVPTAEGMFYEPKWDGFRCIVFRDGDEVELGSRNERPLTRYF
PEVVEAVKAALPERCVVDGEIVVPNGDRLHFEALLQRIHPAESRIRLLAEQTPASFVAFD
LLAIGDESLMETPFAQRRARLQEVVTGTDSVHVTAITQDPDTAQRWFQEFEGAGLDGVVA
KPADLPYGPDQRLMTKVKHVRTADCVVAGFRWHKSGPIVGSLLLGLYDDSGDLQHIGVAA
SFPMARRAELVEELAPYRAEALDGHPWQDWANAQVVNGSNGDEHRMPGAQSRWNAGKDLS
WVPMRPELVVEVKYDQLEGRRLRHTGQFLRWRPDREARSCTYDQLEVPVRYDLAEVFDG

NT seq 1080 nt +upstreamnt +downstreamnt
atggacctgcccctgctgccgccggtgaagccgatgctggccaaggccgtgaccaaggtg
cccaccgccgagggcatgttctacgagccgaagtgggacggcttccggtgcatcgtcttc
cgggacggcgacgaggtggagctgggcagccgcaacgagcgcccgctgacccgctacttc
cccgaggtggtcgaggcggtcaaggcggcgctgcccgagcgctgtgtggtcgacggcgag
atcgtcgtccccaacggcgaccggctgcacttcgaggcgctgctgcagcgcatccacccg
gccgagtcccgcatccggctgctcgcggagcagacgccggcctccttcgtcgccttcgac
ctgctcgcgatcggggacgagtcgctgatggagaccccgttcgcgcagcggcgggcccgg
ctgcaggaggtcgtgaccggcacggactcggtgcacgtcaccgcgatcacccaggacccc
gacaccgcacagcgctggttccaggagttcgagggcgccggtctggacggcgtcgtggcc
aagcccgccgacctgccgtacggccccgaccagcggttgatgaccaaggtcaagcacgtg
cgcacggcggactgcgtggtggccgggttccgctggcacaagagcgggccgatcgtcggg
tcgctgctgctgggcctctacgacgactccggcgacctgcagcacatcggcgtcgcggcg
tcgttcccgatggcccggcgggccgagctggtcgaggagctggcgccctaccgggccgag
gcgctggacgggcacccgtggcaggactgggcgaacgcgcaggtcgtcaacggcagcaac
ggcgacgagcaccggatgcccggcgcgcagagccgctggaacgccggcaaggacctctcc
tgggtgccgatgcgccccgagctcgtggtggaggtcaagtacgaccagctggagggacgg
cggctgcggcacaccggccagttcctgcgctggcgccccgaccgggaggcgcgcagctgc
acctacgaccagctggaggtgccggtgcgctacgacctggcggaggtcttcgacggctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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