KEGG   Geodermatophilus obscurus: Gobs_4028Help
Entry
Gobs_4028         CDS       T01163                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gob  Geodermatophilus obscurus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gob00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Gobs_4028
Enzymes [BR:gob01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Gobs_4028
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Gobs_4028
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4226712..4227590)
Genome map
AA seq 292 aa AA seqDB search
MPELPEVEVVRRGLERWVAGRSVASVEVHHPRAVRRHLEGAEHFVAALTGRTLTAAHRRG
KYLWLPLAEGDGTPAGQALVAHLGMSGQLLVEKPTQPDETHLRARFTFTDGGRELRFVDQ
RTFGGLAVEDTGEGDTVPPRVAHIAIDPLDPAFDEAEFSTRLRRRRTEVKRALLDQTLIG
GVGNIYADESLWRARLHGNRPTDRLTRAQVGALLEGVRDVLHESLAQGGTSFDSLYVDVN
GQSGYFSRHLAVYGQADRPCPRCGTPIVRESFMNRSSYSCPQCQPRPRARRP
NT seq 879 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagctgcccgaggtcgaggtggtccggcgcggcctggagcgctgggtcgccgga
cgctccgtcgcctccgtcgaggtccaccacccgcgcgccgtccgccgccacctcgagggc
gccgagcacttcgtcgccgcgctgaccgggcgcaccctcaccgccgcccaccgccgcggc
aagtacctgtggctgccgctggccgagggcgacggcacgccggccggccaggcgctcgtc
gcccacctcgggatgagcggccagctgctggtcgagaagcccacccagcccgacgagacc
cacctgcgcgcccgcttcaccttcaccgacggcggtcgcgaactgcgtttcgtcgaccag
cgcacgttcggcgggctggcggtggaggacaccggcgagggcgacaccgtgccgccccgg
gtcgcgcacatcgcgatcgacccactggacccggccttcgacgaggccgagttctccacc
cggttgcgtcggcggcgcacggaggtcaagcgcgcgttgctggaccagacgctgatcggc
ggcgtcggcaacatctacgccgacgagtcgctgtggcgagcccggttgcacggcaaccgc
ccgaccgaccggctcacccgggcccaggtcggcgcgctgctggagggcgtgcgcgacgtc
ctccacgagagcctggcgcagggcggcacctccttcgactcgctctacgtcgacgtcaac
gggcagagcggctacttctcccggcacctagccgtctacggccaggccgaccggccgtgc
ccgcgctgcgggacgccgatcgtgcgcgagtccttcatgaaccgctccagctacagctgc
ccgcagtgccagccgcgcccgagagcccgccgaccgtga

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