KEGG T05256: CXX93

Gordonia sp. YC-JH1: CXX93_12500

Entry

CXX93_12500       CDS       T05256

Symbol

pafA

Name

(GenBank) Pup--protein ligase

K13571

proteasome accessory factor A [EC:6.3.1.19]

Organism

goc Gordonia sp. YC-JH1

Brite

KEGG Orthology (KO) [BR:goc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:goc03051]
    CXX93_12500 (pafA)
Enzymes [BR:goc01000]
6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.1  Acid-D-ammonia (or amine) ligases (amide synthases)
    6.3.1.19  prokaryotic ubiquitin-like protein ligase
     CXX93_12500 (pafA)
Proteasome [BR:goc03051]
Prokaryotic proteasome
  Bacterial regulatory particles
   CXX93_12500 (pafA)

SSDB

Motif

Pfam:

Pup_ligase

Other DBs

NCBI-ProteinID:

AUH70327

Position

complement(2682546..2683904)

AA seq 452 aa
MERRIMGIETEFGVTCTFKGQRRLSPDEVARYLFRRVVAWGRSSNVFLTNGARLYLDVGS
HPEYATAECDSVAQLITHDRAGERILEELLVDAEERLVAEGIGGDIYLFKNNTDSAGNSY
GCHENYLVSRVGEFGRVSDVLLPFLVTRQLICGAGKVLSVGHEARYCLSQRADHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGSALLVLEMIESGISF
HDFALDNPIRAIRDISHDPTGRREIRLAGGRTATALAIQREYHARAVKHLQTRTPDPTLD
RVVDLWGRVLDAVERDDFSGVDTEIDWVIKRKLMQRYQDKYSMELTDPKIAQLDLAYHDI
RRGRGVFDLLSRKGLAARVTTDEAIDEATSTPPQTTRAKLRGDFITAAQKAGRDFTVDWV
HLKINDQAQRNVLCKDPFRNVDERVDRLIASM

NT seq 1359 nt +upstreamnt +downstreamnt
gtggaacgacggatcatgggcatcgagaccgaattcggtgtcacctgcacgttcaaggga
cagcgtcgcctcagcccggacgaggtcgcgcgctacctgttccggcgcgtcgtcgcgtgg
ggccggtcgtcgaacgtcttcctcaccaacggtgcgcggctgtacctcgacgtcggctct
caccccgagtacgccaccgccgaatgcgactcggtggcgcaactgatcacgcacgaccgt
gcgggcgagcggatcctggaggaactgctcgtcgacgccgaggaacgtttggtggccgag
ggcatcggcggcgacatctacctgttcaagaacaacaccgactccgcgggcaactcctac
ggatgccacgagaactacctggtcagccgggtgggggagttcggcagggtctccgatgtg
ctgctgcccttcctcgtgacgcgccagctgatctgcggggcgggcaaggtgctctcggtg
ggccacgaggcgcgctactgcctgtcgcagcgcgccgaccacatctgggagggcgtctcg
tccgcgaccacccggtcgcggccgatcatcaacacacgcgacgagccccacgccgatgcc
gagaagtaccgtcggctgcacgtgatcgtcggcgactccaacatgtccgagaccaccacc
atgctcaaggtcggttccgcactgctggtgctggagatgatcgagtcggggatctcgttc
cacgacttcgcgctcgacaacccgatccgcgcgatccgggacatcagccacgacccgacc
ggccggcgcgagatccggctcgcgggcggacggacggcgacggcgctggcgatccagcgc
gagtaccacgcgcgggccgtcaagcacctgcagacgcgcacgcccgacccgacgctcgat
cgcgtggtggacctgtggggccgtgtcctcgacgccgtggagcgcgacgacttcagcggt
gtcgacaccgagatcgactgggtgatcaagcgcaagctgatgcagcgctaccaggacaag
tactcgatggaactgaccgatccgaagatcgcgcaactcgacctggcctaccacgacatc
cgccggggccgcggcgtcttcgacctgctgtcccgcaaggggctcgcggcacgggtcacc
accgacgaggcgatcgacgaggccacctcgacgccgccgcagaccacccgggccaagctc
cgcggcgacttcatcaccgcggcccagaaggcgggacgagacttcaccgtcgactgggtg
catctgaagatcaacgatcaggcgcagcggaacgtgctctgcaaggacccgttccggaac
gtcgatgagcgcgtcgatcggctgatcgcgtcgatgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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