KEGG   Gordonia phthalatica: ACH46_02120
Entry
ACH46_02120       CDS       T04097                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
goq  Gordonia phthalatica
Brite
KEGG Orthology (KO) [BR:goq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:goq03032]
    ACH46_02120
   03400 DNA repair and recombination proteins [BR:goq03400]
    ACH46_02120
Enzymes [BR:goq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ACH46_02120
DNA replication proteins [BR:goq03032]
 Prokaryotic type
  DNA Topoisomerases
   ACH46_02120
DNA repair and recombination proteins [BR:goq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ACH46_02120
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim HC2 Toprim_4 Toprim_2
Other DBs
NCBI-ProteinID: ALG83523
UniProt: A0A0N9MLT0
Position
460015..463113
AA seq 1032 aa
MAATDNASPAVRRLVIVESPTKARKIAGYLGRNYVVESSRGHIRDLPRGAADVPAKYKGQ
SWARLGVNVDDSFEPLYVVSPDKKSTVTELKSLLKDVDELYLATDGDREGEAIAWHLLET
LKPKVPVKRMVFHEITESAILAAAANPRELDMPMVDAQETRRILDRLYGYEVSPVLWKKV
MPKLSAGRVQSVATRIIVERERERMAFVSADYWDIAATMDAGAEASPRTFNSRLVNIGDD
RVATGRDFGPDGKLKKASGVAVLDEARATALAAGLEGASLTVTSVEEKPYTRRPYAPFMT
STLQQEAGRKLRFSSDRTMRIAQKLYENGYITYMRTDSTTLSESAINAARNQARQLYGDA
YVHPTPRQYTRKVKNAQEAHEAIRPAGDSFRTPGQVASALNTDEFKLYELIWQRTVASQM
ADARGTTMSLRIGGRAATGEEVTFASSGRTITFPGFLSAYVETVDALAGGQADDAENRLP
NLREGQALTAASLTADGHSTNPPARYTEASLVKTLEELGIGRPSTYASIIGTIQDRGYVV
KKGSALVPSWVAFAVVGLLEGYFNSLVDYDFTASLEDDLDQIASGNEDRTRWLTEFYFGA
DAEAAGAGDDDAAGAMARAGGLKKLVGVNLEGIDAREVNSIRLFDDAEGRPVLVRVGRYG
PYLERNVAGPDAEPDLKRANLPADMTPDELTLEVAEKLFATPQEGRVLGVDPVSGNQIVA
KEGRFGPYVTEILPSEDDEKDDEDPGTSAPVPTIPAGPTPRGGGEEVVALDEVPVGGGVA
TATSTTTAKKAAKKTAKKAAKKAGPKPRTGSLFKGMEISTVTLEDALKLLSLPRVVGVDP
ESNDEITAQNGRYGPYLKKGTDSRSLASEDQLFTVTLEEALKIYSEPKRRGRAAAAPPLR
ELGNDSVSEKPMVIKDGRFGPYVTDGETNASLRKGDEVATITPERAMELLADRRARGPAK
KAAKKTAKKTAAKKTAAKKTAAKKTAAKKTAAKKTAAKKTTAAKKTTAKKTAAKKTTAAK
KTAAKKSAPKSE
NT seq 3099 nt   +upstreamnt  +downstreamnt
gtggccgccaccgacaacgcatcccccgccgtccggcgtctcgtcatcgtggagtcgccg
accaaagcgcgcaagatcgcgggctatctcggcaggaactacgtcgtcgagtcgtcgcgc
ggacacatccgcgaccttcctcgcggagcggccgacgtgcccgccaagtacaagggccag
tcgtgggcgcgcctcggcgtcaacgtcgacgacagcttcgagccgctgtacgtggtctcc
ccggacaagaagtcgacggtcaccgaactcaagtcgctgctgaaggacgtcgacgagctc
tacctcgccacggacggtgaccgcgagggggaggccatcgcgtggcacctcctcgagacc
ctgaagccgaaggtgccggtcaagcggatggtcttccacgagatcaccgagtcggcgatc
ctggctgccgccgcaaacccgcgcgagctcgacatgccgatggtcgacgcgcaggagacc
cgccgcatcctcgaccgcctgtacggctacgaggtgtcgccggtcctgtggaagaaagtc
atgccgaagctgtcggcgggccgcgtccagtcggtcgccacacggatcatcgtcgagcgg
gaacgcgagcgcatggcgttcgtctccgccgactactgggacatcgctgcgaccatggac
gccggcgccgaggcgtcgccgcgcaccttcaactcgcgactggtgaacatcggcgacgac
cgcgtcgccacgggccgcgacttcggcccggacggcaagctcaagaaggcgtccggcgtc
gccgttctcgacgaggcgcgcgcgacggcgttggccgcgggcctcgagggtgcgtcgctg
accgtcacctcggtggaggagaagccctacacccgccgcccgtacgcgccgttcatgacg
tcgaccctccagcaggaggccggccgcaagttgcgcttctcctcggaccgcaccatgcgc
attgcgcagaagctgtacgagaacggctacatcacctacatgcgtaccgactcgacgacg
ctgtcggagtcggccatcaacgccgcacgcaatcaggcacgacagctctacggcgacgcc
tacgtgcatccgacgccgcgtcagtacacccgcaaggtgaagaacgcgcaggaggcgcac
gaggccatccgcccggcgggcgactcgttccgcacccccggtcaggtggcgtcggcgctc
aacacggacgagttcaagctgtacgaactgatctggcagcggaccgtcgcctcccagatg
gccgacgcccgcggcaccaccatgagcctgcggatcggcggtcgtgccgcgaccggcgaa
gaggtcacgttcgcctcgtccggccgcaccatcacgttccccggcttcctgtcggcgtac
gtcgagacggtcgacgccctcgcaggcggccaggccgacgacgccgagaaccgcctgccg
aacctccgcgagggacaggcgctcaccgccgcgtcgctgaccgccgacggccactccacc
aatccgcccgcccgctacaccgaggcatcgctggtcaagacgctggaagagctcggaatc
ggtcgcccgtcgacgtacgcgtcgatcatcggcaccatccaggaccgcggttacgtggtg
aagaagggcagcgcgctggtcccgtcgtgggtggcgttcgccgtcgtcgggctgttggag
ggctacttcaacagcctcgtcgactacgacttcacggcgtcgctggaagacgacctggac
cagatcgcgtccggcaacgaggaccgcacccgctggctcaccgagttctacttcggtgcc
gacgcggaggcggccggtgccggtgacgacgacgccgccggagcgatggcgcgtgcgggc
gggctcaagaagctcgtcggcgtgaacctggagggcatcgacgcccgcgaggtgaactcg
atccgcttgttcgacgacgccgagggccgcccggtcctggtgcgcgtcggccgctacggt
ccgtacctggaacgcaatgtggccgggcccgacgccgagcccgacctgaagcgcgccaac
ctgcctgccgacatgacgcccgacgagctgaccctggaggtggcggagaagctcttcgcg
accccgcaggaagggcgcgtcctgggcgtggatccggtcagcggcaaccagatcgtcgcc
aaggagggccgattcggcccgtacgtcaccgagatcctgccgtcggaggacgacgagaag
gacgacgaggaccccggcacgtcggcaccggtgccgacgattccggcgggtcccacgcct
cggggcggcggcgaagaagtcgtcgcactcgacgaggtgccggtgggcggcggagtcgcg
accgcgacgtccacgaccaccgcgaagaaggctgcgaagaagaccgcgaagaaggcggcg
aagaaggccggccccaagccgcgcaccggctcgctgttcaagggcatggagatctcgacc
gtcacgctcgaggacgcactgaagctgctgtcgctgccgcgcgtcgtcggcgtggatccc
gagagcaacgacgagatcaccgcgcagaacggccggtacggcccgtacctgaagaagggt
acggactcgcggtcgctggccagcgaggaccagctcttcacggtgacgcttgaggaagcg
ctcaagatctattcggagccgaagcggcgcggtcgtgccgcggccgccccgccgctgcgt
gagctcggcaacgactccgtcagcgagaagccgatggtgatcaaggacggccgcttcggc
ccgtacgtcaccgacggcgagaccaacgccagcctgcgcaagggcgacgaggtcgccacc
atcacgcccgagcgcgcgatggaactgctggccgatcgtcgtgcgcgcggcccggcgaag
aaggctgcgaagaagaccgccaagaagacggcggccaagaagacggcggccaagaagaca
gcagcgaagaagacagcggccaagaagaccgcagcgaagaagaccgcagcgaagaagacg
acggccgccaagaagacgacagccaagaagactgcggctaagaagacgacggcggccaag
aagaccgcggctaagaagtcggctccgaagtcggagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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